Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02398 ATGAGGATGAAGATGCTCATTCTGATAGCATTTACCTTTGTTTCCGTGGTTATCAAGGCTAGATCTGAGTCTGAGCTCCTGTTCCAAAACGATACCGTTTCATCTGCTGCAAAGCCTCTCTTGGTTCCTCTCACTCTTATTCAGGAAGCTGCTTCCAAAGGAGCCGTTTGTTTGGATGGAACGTTGCCTGGTTACCACTTTCATCCTGGTTTTGGATCTGGAGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATAAAAAGTTGTGTGTTCAGAAAAACTACTCGTCGTGGTTCCTCAAAATTCATGGAAAAGCAACTAGCATTCACAGGGATATTGAGCAATAAAGCTGAAGAAAACCCCGATTTCTTTAACTGGAACAGAGTTAAAGTACGGTACTGTGATGGGGCATCTTTTAGTGGAGATAGTCAAAACAAGGCTGCAGACCTTCAATTCCGAGGACAAAAGATTTGGCAAGCTGCAATGGAGGAATTATTGTCAAAGGGAATGCAGAAGGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCAGGTGGTCTAGCATCTATAATACATTGTGATGAGTTCCGGACCTTGTTTCCTAGATCTACCAAAGTGAAATGTTTGAGTGACGCAGGGCTTTTCCTTGATGCAGTTGATGTTTCTGGGGTTCGCACAATGAGGAATCTGTTTGGAGGTGTAGTTAACTTACAGGAAGTGCAAAAAAATCTGCCAAAAAGTTGTCTCAACCAATTGGACCCAACTTCGTGCTTTTTTCCTCAGAATTTGGTGAACCATGTTGAGACTCCATTGTTTCTACTTAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGTCCCTCCTTCAGCAGATCCCCATGGCTCTTGGCATGATTGTAAATATAATCATGCACGCTGTAACTCATCTCAAATTCAGTTCTTCCAAGACTTCAGAAATCAAATGCTAAACGAAGTCAAAGGCTCCTCAGGGGAGTCTCAAACTGGGTTATTCATCAATTCTTGTTTTGCCCATTGCCAGTCCGAAAGACAGGATACTTGGTTTGCTGATGACTCTCCACTTATTAACAGGATGCCAATTGCAATTGCTGTTGGAGACTGGTTTTTCGATCGGAAAATTGTCAAAGCTATAGACTGTGCTTATCCCTGTGACAAAACCTGCCACAATCTAGTCTTCAAAGCTGGTAGATCTACTGTGGTGGACTACCAGTCCTCAAGTGGTGATGACACATCTACCATGACCATGACATATTCTCGCTCCACCAGGCTGCCTTATAGTGCTGGCCTATATATGCTAAGTATTTTATTGTTAATTAATTGCTCCTAG 1362 0.4288 MRMKMLILIAFTFVSVVIKARSESELLFQNDTVSSAAKPLLVPLTLIQEAASKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNTIKSCVFRKTTRRGSSKFMEKQLAFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNKAADLQFRGQKIWQAAMEELLSKGMQKANQALLSGCSAGGLASIIHCDEFRTLFPRSTKVKCLSDAGLFLDAVDVSGVRTMRNLFGGVVNLQEVQKNLPKSCLNQLDPTSCFFPQNLVNHVETPLFLLNAAYDAWQVQESLVPPSADPHGSWHDCKYNHARCNSSQIQFFQDFRNQMLNEVKGSSGESQTGLFINSCFAHCQSERQDTWFADDSPLINRMPIAIAVGDWFFDRKIVKAIDCAYPCDKTCHNLVFKAGRSTVVDYQSSSGDDTSTMTMTYSRSTRLPYSAGLYMLSILLLINCS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02398 453 Pfam Pectinacetylesterase 36 384 IPR004963 GO:0016787
Spst1g02398 453 PANTHER NOTUM-RELATED 27 401 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02398 Spst-Chr1 32577849 32583175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02398 5 405 Carbohydrate Esterase AT2G46930 68.579 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02398 K19882 - gmx:100785270 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02398 1 32577849 32583175 Spst10g01839 10 18680470 18684801 PCT