Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02395 ATGACGCAGCGTGTGTTGGAATTCCGCGCCGAAGAAGGAAAAAAACTCTCCCTTCTAAAATGGGTCTGCCTCTCTATTCGCCTCTCATCTCTCTTTCACTGCACCCTCTTTCCAGCTCTTAGATCTGTTTCTCAACCACTGCCCACCAGACCCACTTTGCAAGACTGTGTTTTGACCTCTTTTTATGCCACTTTAGCCCGAAACAGAAAATGGGTTCAGAAACCTTGTGGTGTTGGCATCTCTGTCTCAGGGGTGTTTGCATTTGTTGGAATAATAATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCTTTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTGGAGCCATTAGATGAAGGGTTGGGCCACTCTTTCTGTTATGTTAGGCCTTCTATTTTTGAATCTCCTGCCATTACCCCATCAAACTCTGAGAGGTTTACTGTTGACTCTAGCACCCTTGATTCTGAGACATTGAGTGGCTCATTTAGGCATGAGAGCATCGAAGAGAGACCTGGCAAGAATGTTCCGGAAACCACATTCAAAACAATATCAGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCAAGGACAGGTAACCAGAATGCTCTACTTGCCAGTGATGTTCTAGAGCCTGCTGCATCTTTTGAGGGAACCTCTTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGCGGTTCTGGACCTTTGAATGGATTCATGTCGGGTCCTTTGGAGAGATTCGCTTCCGGTCCATTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTTATGTCAGGACCTCTTGATGCCACTGACAAGTCCAACTTTTCAGCGCCCCTTGCTCGTGGTCGACGAAGGCCACACCTCCAGCGCCTTATGAGAAGTGTGAGTGGTCCTATGAGAAACACTTTTTCTAGGACTTTTTCGAAGCACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCAAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGTTGGATCGTCCGAGTTAGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCTGGGGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCGGATGCTCCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTTAAACCTGAAGTCCTTAATAATGGAAATGATGCAATTGCTCTAGAATGCGGTAGGGAGGAAGTGTCTGATGCTCATAACATTTCAAATGAAGAAAGTTCTTGCTGTTTAGAAACTTCTTGTCCAGTAATAGTTGATCAATCATCTAATAGTGAAATAGTGGAGGTAAATGCTGAACAGAAAAATTGTGGAAGTCCCAGTGTTGACCATCCTGTTCCTGTATCTGTTCCAATTGGACAGTTGAGTGGTCAAGGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAGGTGTCAGAACATGACAAGTATTCTATAGTTCCTGGGGAAATAACACAAGAAAGGCAGTTGAGGTTCTGCTCATCTGATGGTAAAGAGGATAGATCTGGACACCAGGATGAATGTCCTACTACTTCAGGGGAAAATGGAGGCCCTGGGTTTAATTCAACCAAACAGGAGCCAATAGCTCCCTTTTGTGTTTCAGGACGAAGGCAGAATTCGAGAAAGTCATTTATTGGTACAAAAATCAGAAAAATGTACAGGAAACAGAAGTCCTTACGTAAGAAACTCTTTCCTTGGAGTTATGATTGGCATAGGGAGGAATCTTGTTTTAACAAGAAATTAGTGGAATCCTCAGGACCCTTTAGAATATGCAAGTCTGGCGTAGATCATAATGCAGTTTTAAGTGCAATGGCGCGGGCTCTTGAAAGAACAGAAGAGGCATACATGAAAATGGTGGAGAACAATATGGATAAAAATCCAGAACTTGCCTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTTTTGAACCTTGGAGATAGTCGTGCAATTTTGGCTCAAGAACGACCAAATGATCGTCATCCTAATCCCTGTCTCATCAAAGACGACTTGAGGCATAGGAACAGATCTAGAGAGTCATTAGTGGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAATATAAACAAGCATGTTAACAAGATAAACAAAAACCGAGAGATATCCATGTGCCGATTGAAAATGAGGGCTGTTCAGCTTTCCACAGATCATAGTACAAGTATTGAAGAGGAAGTTTTCAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTTACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATCTTTTAACGAACCTCTACTGAAGATGTTTCGAGTTGATTATGTGGGGAGTGGTCCATACCTAAGTTGCGCTTCTTCTGTTGTTCATCACCGGCTTTCCTCAAGCGATCGGTTCCTGGTGCTGTCCTCTGATGGGCTTTACCAGTATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACGTGGTTCATGGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTCATAGCAGAGCTTCTCTTCCGTGCCGCTAAAAAGAATGGAATGGATTTTCATGAATTGCTGGATATTCCTCACGGAGATCGCCGTAAATATCATGATGATGTTTCTGTCATGGTCGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2919 0.4385 MTQRVLEFRAEEGKKLSLLKWVCLSIRLSSLFHCTLFPALRSVSQPLPTRPTLQDCVLTSFYATLARNRKWVQKPCGVGISVSGVFAFVGIIMGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVPETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSKHSMGVSWVQRLFLHPVSQLAWNSKEAKFRSEVSRNCTEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPEVLNNGNDAIALECGREEVSDAHNISNEESSCCLETSCPVIVDQSSNSEIVEVNAEQKNCGSPSVDHPVPVSVPIGQLSGQGRRSVRLYELLQMESWNEQVSEHDKYSIVPGEITQERQLRFCSSDGKEDRSGHQDECPTTSGENGGPGFNSTKQEPIAPFCVSGRRQNSRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREESCFNKKLVESSGPFRICKSGVDHNAVLSAMARALERTEEAYMKMVENNMDKNPELALMGSCVLVMLMKDQDVYVLNLGDSRAILAQERPNDRHPNPCLIKDDLRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPSFNEPLLKMFRVDYVGSGPYLSCASSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02395 972 MobiDBLite consensus disorder prediction 563 596 - -
Spst1g02395 972 FunFam Protein phosphatase 2C 32 340 501 - -
Spst1g02395 972 PANTHER PROTEIN PHOSPHATASE 2C 365 962 IPR015655 GO:0004722|GO:0006470
Spst1g02395 972 Pfam Protein phosphatase 2C 788 934 IPR001932 -
Spst1g02395 972 Gene3D - 337 501 IPR036457 -
Spst1g02395 972 SUPERFAMILY PP2C-like 375 964 IPR036457 -
Spst1g02395 972 Gene3D - 542 969 IPR036457 -
Spst1g02395 972 MobiDBLite consensus disorder prediction 577 591 - -
Spst1g02395 972 CDD PP2Cc 669 963 IPR001932 -
Spst1g02395 972 ProSiteProfiles PPM-type phosphatase domain profile. 361 963 IPR001932 -
Spst1g02395 972 SMART PP2C_4 363 961 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02395 Spst-Chr1 32526219 32535836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02395 93 972 PP2C-type Phosphatase Gene Family AT2G46920 64.054 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02395 - - gmx:100786856 1659.81