Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02374 ATGGCAGATGAAAGCACACTCAACTGCATCGATATCCTCCTTGCCATCCTCCTTCCTCCTCTTGGTGTTTTCCTCAAGTTTGGCTGCAAGGTAGAGTTCTGGATCTGTTTGTTGCTCACCATTTTCGGCTACATTCCTGGAATTATCTACGCTGTCTATGCCATCACCAA 170 0.4647 MADESTLNCIDILLAILLPPLGVFLKFGCKVEFWICLLLTIFGYIPGIIYAVYAIT 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02374 56 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016020
Spst1g02374 56 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016020
Spst1g02374 56 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 8 56 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02374 Spst-Chr1 32320765 32321068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02374 5 56 RCI2 Gene Family AT3G05890 75.000 3.33e-24 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02374 - - oeu:111387488 104.76