Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02371 ATGGACTATCGATGGACCAATGGGAGGCAGGAAACAGGTGGCCGTGACAGGAGGCAATCTAAAAGGGAACAGGCATATACGGACTCTCTTATTGAGGATTTGTCAGAGGATTTCCGCTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTCTGGACACACAGTTAACATCAACTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCACTGAGCCAATAAAATCTGGGATTAGAGATCCAAGACTTGGAGTTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAAGAACATGTGAAGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAACGAAATCCGGAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCTATGGAGTTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGTAGAGATGATAGGCAAAAGAGAGAACAACAGCGTCAGGAGAGAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAGCGGCTTCAACTGCAACAAGAGTCTGGATCAGGAACAGTGTCCTCTGAGTCTAGAACTGCTACTGCCCTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCGACTAAAGGCAGTGCTTCCAAGCAGATAACATTTGGTGCCAAGAAACAAAATGTTGCAAAGAAGCAAAATGTTCCCATCTCGTCTATATTTAATAATGATAGTGATGAAGAATAA 918 0.4183 MDYRWTNGRQETGGRDRRQSKREQAYTDSLIEDLSEDFRLPINHRPTENVDLDNVEQASLDTQLTSTNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVNEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQRLQLQQESGSGTVSSESRTATALTDQEQRNTLKFGFSTKGSASKQITFGAKKQNVAKKQNVPISSIFNNDSDEE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02371 305 MobiDBLite consensus disorder prediction 192 222 - -
Spst1g02371 305 MobiDBLite consensus disorder prediction 227 299 - -
Spst1g02371 305 SUPERFAMILY beta-beta-alpha zinc fingers 148 189 IPR036236 -
Spst1g02371 305 MobiDBLite consensus disorder prediction 9 25 - -
Spst1g02371 305 SMART G-patch_5 64 109 IPR000467 GO:0003676
Spst1g02371 305 MobiDBLite consensus disorder prediction 192 305 - -
Spst1g02371 305 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Spst1g02371 305 MobiDBLite consensus disorder prediction 1 25 - -
Spst1g02371 305 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 305 - -
Spst1g02371 305 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Spst1g02371 305 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Spst1g02371 305 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02371 1 305 C2H2 Transcription Factor Family AT5G26610 62.581 9.54e-124 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02371 - - gmx:100793206 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02371 1 32283251 32286133 Spst1g02371 1 32283251 32286133 ECH