LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g02368	ATGAACGACGCAGGTGTCTCTAGGCAAATCCAGCAGATGTTGGTCGAAGCCGACAAGAAGAAGATTAGACAAGAGTACAAACGCAAAGAGCGCCAAGTCGAAATTCGCAAGAAGATGCTCATTACCAAGAGATCAAGAGCGCATGGTCTTGTGGAGGATTCTGAGAATGCGCGTTTCATGATTTTTGAGAGGGGTCCAAGGGCTTTTATTGATGAAACAGTTAAGTTGTTGCGTGGACTCACTGCCCAGGGTTCGTCCACACAGAGTCTGTGTCAATCTGCATCTGATTTTATCGATGAGAGAGTAGCTGTTTTGAGTTGCTTAAGATATTCACTTGCCACATTTTTGGCTCAGGTTTATATGGAAGTTGATACAATTGGAGAGGAGTTAGTGGCAGATCCAGAGACGAAGCTGCCCTCGTTAGTTACAATTAATGATTTGTTTTCAATATTAGAAACTTCAATTGGACATCTACATGCAACACGTCAGAGTGATTCTTCTGTCGATGGGAGCTATTCAATCCCTCTGCTATTTGAGAAGTTGCCAAAAATAAATCAGGAGGGATCTCCGTGGACAGATTGTGAAATAACAGATGCTATCAATCTAGTTTATCAAAATTTAGACAAGCTGGATGCATACATATCATTTCTTGTCATCAAACATAGAAAGCCAAGGAAAATGACTCAATATTGGATCCGTTATACATGTGGTGCAGTTGGGCTGTCAGTATGCTCCATTTGGCTCTTGCGGCATAGTAGATTGGTGGGAAGTTCTGACCTTGATAATTGGGTTCAGGAAGCTAGGAGCTCAACAATTAGGTTTCTTAAGAACCACGTAGAGCAATTGATTTTGTCTATTAGGGATGAACTTTTGGAGACATTCAGGAAGAGACATCAAGGTTTTATGGACCTTGAAGAGCTATTGATTGCAAGCTTGACTAGTTGTGATGGCTTCGGTACCATAGACTGCAGAGAGGGATTTGGTTTGGTGATTGTGCTGCGCTCTGTTTCTGTGGGTTCTGTTGTGTTGCAAATCGTATATGGGGGAACAGGGTATATGGGGGAACAGGGTTGTTTAAGTTTCGGCCTCGAGGATGTTGGTAGAGAACTCACGACATATGAAGAAGAACATGGTTCGGTGTTTGGTTGCACAGCAGAAAAGTTGGATGCTCGTTTAATGGAAGCAAATTGTTAG	1194	0.4246	MNDAGVSRQIQQMLVEADKKKIRQEYKRKERQVEIRKKMLITKRSRAHGLVEDSENARFMIFERGPRAFIDETVKLLRGLTAQGSSTQSLCQSASDFIDERVAVLSCLRYSLATFLAQVYMEVDTIGEELVADPETKLPSLVTINDLFSILETSIGHLHATRQSDSSVDGSYSIPLLFEKLPKINQEGSPWTDCEITDAINLVYQNLDKLDAYISFLVIKHRKPRKMTQYWIRYTCGAVGLSVCSIWLLRHSRLVGSSDLDNWVQEARSSTIRFLKNHVEQLILSIRDELLETFRKRHQGFMDLEELLIASLTSCDGFGTIDCREGFGLVIVLRSVSVGSVVLQIVYGGTGYMGEQGCLSFGLEDVGRELTTYEEEHGSVFGCTAEKLDARLMEANC	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g02368	397	PANTHER	NUCLEAR CONTROL OF ATPASE PROTEIN 2	52	307	IPR013946	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g02368	Spst-Chr1	32267090	32270829	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g02368	1	39	Primary Pumps ATPases(2)	AT1G64200	42.647	1.00e-06	47.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g02368	K18158		-	gmx:100779252	434.491