Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02367 ATGGACGATAGCTCCAAGGAAAGGGAAAGGTTGATTTTAAACATAGTGATCATAGTGGTATCCATGATCGTGATTGCATTGCTCACCTTCTCTATTGTTGCACGCATAGATGGTCGCGAACAAGATGCAGGGAATCTAAAGTCTCTTCTTTCTATTTGCTCTAAAACAGAGGAACCAGATTGTTGTTTCCGTGTGTTGAAACACGTAGGTGACAGAGCCACGATTCTGAATTATGTGAAAGCTGCCATTAATGCAACCCTAGCTGAATTACTTGTGGTGATTAGGCCTAAACCTCGTCTTGAAATGAGCCTCACGCGTCTGCAGAGACAGTCATATGAAGATTGTTTGGAGCTATTGAGTTTGGGACAGGAAGAACTAGAATCTCTGTATGCGACGACAAATTCTTATACAGAGTTGTGCAAACTAAACCTTGATGATGTGTTGAACAGCCTAAGCGCTGTAATCTCATATCAACACACTTGTTCTGATGAATTAATGCGAACAAATAACTATGAGATTTTGGGATATTCCTTGGAGGTGCCAATTGTTCTTACAAGGATAACCTTAGCCATTTTTAATAATTTTTCAGAGAGGCCTTACAGTAGAGAAAGACAAGGACTAACTCAAAACACAGAGCGCAAAATGATAGAGTCTGAAGGAGATGAGTGTGGGATGAGGGCAATAAGTATAGTCGTGGCTCAAGATGGAAGTGGTAATTTCTCAACCATAGCTAACTCCCTGGATGCATGTCCAAACAATAGCAAGTGTGGATGTATTATTTACGTGAAAAAAGGTAAATACGAGGAGAGGGTTGTGATTCCTAAGAATGTAAGCCATTTGTTAATGTATGGTGATGGGCCTGAGAACACCATTGTCGTTGGTATCAACACAACACACTCCAATACTGTCACAACATCCTTTCGAGCAGCTACTTTCGTGGTGATGGGGAAAGGATTCATCTGCAAAGGCATGGGTTTCACTGCCCCAGAAGGTATTGCAGGAGCACCAGCACTCCTTGTTCTTTCTGATCAAGCAGCATTCTTCAACTGCAAAATTGATGGTAAAGAAGGCAGCTTGTATGCAGTAGCCCAACGCCAATTCTACCGAGACTGTGAGATTCTTGGCAGTGTGGACATCATCAAGGGAGACTCTGCAACTGTAGCTCAGAACTCAAAAATCATTGTGAAGGCTCAAAATTCTTCTGATTTTGTTTTAAGGAGAAATGTTGTGAGTGCTCAATCCAGGTTGGACAGGTATCAAACGACAGGGCTTGTGATCCAGAACTGCACCATCACAGCACAGGGAGAAATCATGAACAATCTTACTGCTACCACTTACTTGGGATCCCCATATAGTGCATACTCAAGAACTATCATTATGGAATCATTTCTAGGAGATGTGATACATCCAAAAGGTTGGTGTAAATGGAGTGACAACTATGGCATAAAAACAGGAATCTTTCGGGAGTTTGAAAATAGAGGGCCCGGGGCAAGAACTGATGGAAGGGTAAGGTGGAATGGCTACAGAACAATCTTTGAGAGAGCCCAAATGGTTGATTACACAGTTAGTGAGTTTATTCAGGGAGACCAATGGTTGCAAAATACAGGCATTCCGCATGAATCTGGGTTTTTTGTACAGAAATAG 1644 0.4197 MDDSSKERERLILNIVIIVVSMIVIALLTFSIVARIDGREQDAGNLKSLLSICSKTEEPDCCFRVLKHVGDRATILNYVKAAINATLAELLVVIRPKPRLEMSLTRLQRQSYEDCLELLSLGQEELESLYATTNSYTELCKLNLDDVLNSLSAVISYQHTCSDELMRTNNYEILGYSLEVPIVLTRITLAIFNNFSERPYSRERQGLTQNTERKMIESEGDECGMRAISIVVAQDGSGNFSTIANSLDACPNNSKCGCIIYVKKGKYEERVVIPKNVSHLLMYGDGPENTIVVGINTTHSNTVTTSFRAATFVVMGKGFICKGMGFTAPEGIAGAPALLVLSDQAAFFNCKIDGKEGSLYAVAQRQFYRDCEILGSVDIIKGDSATVAQNSKIIVKAQNSSDFVLRRNVVSAQSRLDRYQTTGLVIQNCTITAQGEIMNNLTATTYLGSPYSAYSRTIIMESFLGDVIHPKGWCKWSDNYGIKTGIFREFENRGPGARTDGRVRWNGYRTIFERAQMVDYTVSEFIQGDQWLQNTGIPHESGFFVQK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02367 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 195 IPR035513 -
Spst1g02367 547 SUPERFAMILY Pectin lyase-like 227 540 IPR011050 -
Spst1g02367 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 195 IPR035513 -
Spst1g02367 547 Gene3D - 227 545 IPR012334 -
Spst1g02367 547 CDD PMEI-like_3 51 196 - -
Spst1g02367 547 FunFam Pectinesterase 228 539 - -
Spst1g02367 547 Pfam Pectinesterase 230 529 IPR000070 GO:0030599|GO:0042545
Spst1g02367 547 PANTHER PECTINESTERASE 23 533 - -
Spst1g02367 547 NCBIfam pectinesterase inhibitor domain 20 193 IPR006501 GO:0004857
Spst1g02367 547 SMART PMEI_2 44 191 IPR006501 GO:0004857
Spst1g02367 547 Pfam Plant invertase/pectin methylesterase inhibitor 51 167 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02367 Spst-Chr1 32263819 32265918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02367 2 545 Carbohydrate Esterase AT3G05610 32.414 1.16e-90 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02367 K01051 - gmx:102665007 783.867