Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02362 ATGGGGTTTAGTCTTAATGCTGAATTATCCAAGAAAACTCCCATTTTTGGTCTCAAAGTTTGGGAATTAATTGGAATTGTAGTTGGTTTGTCTATCATAGTCATTCTTTCTGTGGTCTCACTTTGCCTCACGTCAAGGAAGAAATATAGAAAAGAGAAAGGCAGGATTCCCCTTAGTCAAATACCAACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTTGAACAAGTGTCAACTAAAGCATTTGCTCCTCGTGATGGAATACTTCTTACAATTCAGAACAAGTCAAGTGACACGGAATCAGACAATGTAATGGTTCATTTAGGTGTGGGGAAGATGAAGAATGGGAATAGCAGCACTCACTCAGATTCATTTCGTTACACAGAGAAAGATGGAAGTGGTTCACACTCACAATCAGGAGAAGAAGGAAGCTCTGGTACGTTTACAGTGTACAAGCAATCTTCTTCACACCCTGTAACAGCTCCCTCACCTCTATCTGGCCTTCCGGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCCACAAACCGTTTTTCCAAAGAAAATGTCCTCGGTGAAGGAGGGTATGGAGTGGTTTATAGGGGGCAGTTGGTCAATGGAACTCCAGTGGCAGTTAAGAAGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACACAAAAACTTGGTTCGCCTTTTGGGGTACTGCATTGAGGGAACTCACAGAATGTTAATTTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGGTATGCGCCACCATGGATACCTTACCTGGGAAGCACGTATCAAGATTCTGCTTGGCACAGCCAAAGCGCTAGCATATTTGCATGAAGCAATTGAGCCAAAAGTGGTACACCGGGATATCAAGTCAAGCAACATATTAATTGATGATGATTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGCTATGTCACCACAAGAGTTATGGGAACTTTTGGATACGTGGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACTGGAAGAGATCCAGTTGACTATGGTCGACCAGCAAATGAAGTGAACCTGGTTGATTGGCTGAAGATGATGGTTGGAAATAGGAGATCAGAAGAAGTGGTGGACCCCAACATTGAGGTGAAGCCAAGCACTAGAGCTTTAAAACGGGCTCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGGGCCATGTCGTTCGAATGCTGGAGTCAGAGGAATACCCTTTACTAAGAGAGGACCGAAGACACCGAAGAAGAAATCAAGGGGGTAGTGGAGAAATATATTCTGACACAGACAGAAGTGAGGTTCAGGGTTCTGGAGAAGAAAGAAGAGGGTGA 1518 0.4321 MGFSLNAELSKKTPIFGLKVWELIGIVVGLSIIVILSVVSLCLTSRKKYRKEKGRIPLSQIPTVSKEIKEVRVEQVSTKAFAPRDGILLTIQNKSSDTESDNVMVHLGVGKMKNGNSSTHSDSFRYTEKDGSGSHSQSGEEGSSGTFTVYKQSSSHPVTAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLIYEYVNNGNLEQWLHGGMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSYVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPANEVNLVDWLKMMVGNRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGHVVRMLESEEYPLLREDRRHRRRNQGGSGEIYSDTDRSEVQGSGEERRG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02362 505 CDD STKc_IRAK 197 463 - -
Spst1g02362 505 MobiDBLite consensus disorder prediction 130 161 - -
Spst1g02362 505 Gene3D Phosphorylase Kinase; domain 1 172 266 - -
Spst1g02362 505 MobiDBLite consensus disorder prediction 110 162 - -
Spst1g02362 505 Gene3D Transferase(Phosphotransferase) domain 1 267 478 - -
Spst1g02362 505 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02362 505 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Spst1g02362 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Spst1g02362 505 PANTHER OS01G0323000 PROTEIN 5 480 - -
Spst1g02362 505 SMART serkin_6 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02362 505 FunFam Putative receptor-like serine/threonine-protein kinase 267 478 - -
Spst1g02362 505 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02362 505 SUPERFAMILY Protein kinase-like (PK-like) 175 470 IPR011009 -
Spst1g02362 505 MobiDBLite consensus disorder prediction 471 505 - -
Spst1g02362 505 FunFam Putative receptor-like protein kinase 173 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02362 Spst-Chr1 32227128 32230876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02362 116 465 Trihelix Transcription Factor Family AT1G70460 45.278 1.12e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst1g02362 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02362 - - gmx:100787014 890.182