Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02347 ATGGCTAGCAGTCTCGCGCCCCTCATCTTAATGATTGCTGTGCAGTTAGTCTATGCAGTGATGAATATTATATCAAAGCTCGCATTAGAATCTGGGATGAACCCTCTTGTCCTTGTTGCATATCGTCAACTCTTTGCTACTCTGTCCATTGCTCCCTTTGCATATTGGCTCGAATGGAAGACACTTCCCAGGTTGACAAAGCATCTTATGTTTCGGATATTATTATCTTCCTTGACAGGAGTTACAGGAAATCAGATTCTATTTTTTGTGGGGCTAAAATTTTCAACGGCTACTATTGCATGTGCACTCACCAATTTGCTCCCAGCGTTCACTTTTATCCTGGCAGTTATCTTCAGACAAGAAGATCTAGGAATCAAGAAGAGGTCTGGCCTAGCAAAGGTCTTCGGGACAGTAATGTGTGTGAGTGGAGCCTTGCTTTTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCCAGTATTCACTGGAGATATGCAGAGAAAATGGAAGGAACTACCTCTTCTGGCTCAGGAAACATGTTTCTAGGCCCTTTACTCTTAATTGGTAGCACCCTTGTTTGGGCACTGTGGTTCGTAATTCAAACAGACATAAGCAAGAAGTTCTCAGCTCCTTACACAAGCACAGGCTTAATGTGTTTCTTCGCAAGCTTTCAGTGTTGCATCATTGCACTGTGTTTCGACCACAGTGCCTCAGCTTGGTTACTCCACGATACCATGAGACTTTCCTCTGCTCTTTACGCGGGAATAGTGTGCACTGGGTTAGCGTATAGCCTCATGTCGTGGGCCATTGAGAGAAAAGGTCCTCTTTATGTCTCTGTATTTACCCCTTTGCAGCTTGTCCTCACTGCCATTTTAAGCTGGGCTTTGCTTCGTGAGAAATTATACGTTGGAACTGCCATAGGATCTCTCTTGATAGTTTTGGGGCTCTATTCTGTCCTTTGGGGAAAGAGTGAAGAGGTGAGCACGAAAGACAGCATTAAAGAGGCAGATAAGGAAGCAATGAAGGATCCTAAGAATGACATGGAAATGCAATCCTATCTGTCATCCAATGGTAATCGTATCAGTACTTGA 1095 0.4365 MASSLAPLILMIAVQLVYAVMNIISKLALESGMNPLVLVAYRQLFATLSIAPFAYWLEWKTLPRLTKHLMFRILLSSLTGVTGNQILFFVGLKFSTATIACALTNLLPAFTFILAVIFRQEDLGIKKRSGLAKVFGTVMCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTTSSGSGNMFLGPLLLIGSTLVWALWFVIQTDISKKFSAPYTSTGLMCFFASFQCCIIALCFDHSASAWLLHDTMRLSSALYAGIVCTGLAYSLMSWAIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAIGSLLIVLGLYSVLWGKSEEVSTKDSIKEADKEAMKDPKNDMEMQSYLSSNGNRIST 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02347 364 Gene3D - 236 324 - -
Spst1g02347 364 MobiDBLite consensus disorder prediction 333 347 - -
Spst1g02347 364 MobiDBLite consensus disorder prediction 333 364 - -
Spst1g02347 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 325 - -
Spst1g02347 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 150 - -
Spst1g02347 364 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020
Spst1g02347 364 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Spst1g02347 364 MobiDBLite consensus disorder prediction 350 364 - -
Spst1g02347 364 PANTHER WAT1-RELATED PROTEIN 7 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02347 Spst-Chr1 32072487 32076101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02347 3 360 Nodulin-like Gene Family AT1G09380 55.096 7.20e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02347 - - gmx:100811613 609.372