Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02328 ATGGTTTGCGAAGAGGAGTTGCTGATTGAAAAAGTGTGCGGGCTGTATGAACAAATCTCAAGCCTGGGGAGTCTGAAACCTTGCAAAAATGTCGACATGCTTTTCACCCAACTTGTCCTCGCATGCATACCCCCTAGCCAAATCGATGTCACAAACCTAAACAAAGACGTGCAAGAGGTTAGATCTAACCTTATAAGACTCTGTGGTGAAGCTGAAGGTCACTTAGAGACCCACTACTCAACCCTCCTAGGCTCATACCACAACCCCCTTGAAAACCTTCATATTTTTCCTTATTATTCTAACTACCTCAAACTTGGTCTCCTTGAGTTCACTATCCTCACCCAACACAGCACTCATGTCCCTGCCAAGATCGCCTTTGTGGGTTCTGGACCCCTTCCTCTCACCTCCATTGTGTTGGCATCAAACCACTTACCTTCCACCACTTTTCACAACTATGACATGGACCCTTTAGCCAATTCCAATGCTATGCGCTTGGTTTCCTCTCACCCTGACTTGTCCAACCGCATGGTTTTTCACACCAGTGACATATTGGATGTCACGAACGCTTTGAAGGAGTACGAGGTTGTTTACTTGGCAGCACTTGTCGGAATGGACAAGGAGGAGAAGAACCGAATCATCGATCACTTGGCCAAGCACATGAACCCTGGGGCATTTCTCATGCTCAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTGGTTGAGCCTTGCGATCTTCGAGGCTTTGAGGTCCTCTCCGTGTTCCACCCCACCGATGAGGTCATCAACTCCGTTGTCATAGCACGAAAATATCCTGTGCCTGTGCACTCCCTTGATCAAGGCCTTGGTTCCATGATCCTTCCCAACAAGTGTTCCGAGATTCAAGCCTTCAACCCCCTCAACCATGGGAACATGATTGAGGAATTGGCCGTTGAAGAGAAACTCTTGTGA 954 0.4822 MVCEEELLIEKVCGLYEQISSLGSLKPCKNVDMLFTQLVLACIPPSQIDVTNLNKDVQEVRSNLIRLCGEAEGHLETHYSTLLGSYHNPLENLHIFPYYSNYLKLGLLEFTILTQHSTHVPAKIAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSHPDLSNRMVFHTSDILDVTNALKEYEVVYLAALVGMDKEEKNRIIDHLAKHMNPGAFLMLRSAHGARAFLYPVVEPCDLRGFEVLSVFHPTDEVINSVVIARKYPVPVHSLDQGLGSMILPNKCSEIQAFNPLNHGNMIEELAVEEKLL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02328 317 Gene3D Vaccinia Virus protein VP39 7 273 IPR029063 -
Spst1g02328 317 PANTHER NICOTIANAMINE SYNTHASE 3 4 312 IPR004298 GO:0030410|GO:0030418
Spst1g02328 317 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Spst1g02328 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 257 IPR029063 -
Spst1g02328 317 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02328 Spst-Chr1 31934366 31935319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02328 1 314 Nicotianamine Synthase Gene Family AT5G04950 60.000 9.12e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02328 K05953 - gmx:100794250 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02328 1 31934366 31935319 Spst1g02328 1 31934366 31935319 ECH