Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02320 ATGGAGAAGAGGCGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAACACCAAATCTCGGAAGAAGCTGATTTGGAATGATCCGGAGGTTTCAAAGCAAGGGAAGGAAAATGTGGAGAATTTGCAGAAGTCACAGCTCACTAGGATAAAGGTGGATGAAATTGGAGTAAGTCCAAGTAACATTCAAAGTTGTGATTTTGACAGTACCCTCTCAGTTTGTAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTGGTAGCGAGACTCATGGGTTTGGATTCATTGCCAGCTTCGGTAGTCACTGAGCCCTCCGCCTGCCTCTCACTCTATGGCTCTAAATCTCATGGAGTCTCGCATTGTAATGAGGGTGCCCTTCACTCAGTGGATGATGAGCTTTGTCCCGCAGATTACATAAACACACTGCTTAAGCTGGAGAAGTCTTCCTTGGGTTCCATGGAGTCAAGGACAAGAAAAGTGGAAAACCTTCCATTAAAGAGATTTCAAACTGAAATGTTACCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCATAATAAACTGTTGTCTCCTATCAAGAGTCCCGGTATTCTGCCACCAAAAAATGTTGCTCACGTGATGGAGGCAGCTGCTAAGATAATTGAGTCAAGTCCTCGGCCGTATTTGAGGAATAGAACCACATCTACTGGGCCTTCATCTGTTCCCCTGCGAATTCTCAATTTGAAAGAGAGATTGGAAGCTGCACAATATGCATCTGTGCCCGGAAAGCCTGTGAATATGAATAAAACCTATCCTGCAAATGACAAGCTTATTGAGAGGAGCAGTAATTTTTCTAAATGCACTTCAGCATTCAAGGGTTCAAGAGGTTCAGAAAAACATAGTTTTTGCAATTTAGCCAGTAAAGGAAAACCAGCTTCACTTGCAATCCAAGCCAAAAACAACTCTCATGGTAGAGATACGTTGATTTCAAATGGTGATATGAAATGCATGAAACAGAAAGAGAAGAACGAGATAAAGTCAAATCAGCACTCAAGGAACCAGAAACTAAGTACACAAAAAGCCATGCAGCAGAGATCTTGCTCAAGTCGGAATGGCAATGTGCTAGGGCAGAATAATCAAAAGCAAAATAGCATGACTGCCCAGGGTAAATTAACTTCAAAAATAGATTCCAATAAGTTAAAAACCCGAGCTTCATCTTCAGAAACTTCTGGAATAAGGAAGACAGCAATCAAGGGCACTATAACTGCCAACATTCAGCCTAAAAGGTCAATCACTAGGGCAACTGGCAACCAAAAAGAGTTTCAAAGACCCAAAACATTATTTACTTCCCGAAAGACAAAATATATCAGCAGTGATGTTTGTGAGGCAAGAGGTCCTGATAATGCAGTAAATAATTTCGGAAGTAAGATCATTAAATGCAATTTTACGACTGATGGAAGCTTTGATCAGGATGCATTTAATATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCATTGAGAAGAAGTATGCCTGAGTCATCTTCCTCTACTGAGCAAATCATGGGAACCAGAAATAGAATTGATGTCCATTCTCTTGAGCATAGTGATAACCTTTATCCCAAAAAATTGTCATTATCTCCACCAGGGAAACATATGATAGACAGAGACGCTTTAAGTGTCCTGTTGGACAAAAAGCTGCAAGAATTGACATCTAGAATTAATTTACCTCAATGTACCTTGGCCACGGAGGGTAGTTCTACTGGTTTGGGATCTAGTGTGCAAGACAAAGTTCCCAGTGTGACAAGCACCATGCATAAGGAACAAGACAGAAGCCTTTGCCCTGACCTGTTTAGTGATAAACTGGACAGCATTCATAACTCTCGTTGTACAAGTGATGATCTAGTGCTTAGCATGAATCAGCAACTGCAGACTTCAGAAGTAAGTCAAGATCCTAGCTGTAGCAGCAATAGTGAAAGTGGAAATGATCTAGTGCGTTGGTATTCAACTGCTGTTGTGGGTTTCGAAACTCCTTTTGTCAGTGAAAGTTACTTGGATAGTGAAGACAGTGCTTATGGCAGCACAGTTTATTCTTCCATGCAAGATGAAGAAATATCTAGTTTTTCCCAGATAAGCGAATCTGTATCACTTGAAAGTGAGATGAAAGGACCAGAGCAAAGCCCTTTTACATTGGGGGACGGAAATATGACCACCAAACAAGTAAGTAACACAGAGCTTGAATATGTACAAGATATTCTTGGCAATGCAGAGTTTATGGCAGAAGAATTTGCCATGGGTCAAACTAGTACAGTCATAATGCCAAATCTATTTGATCTGTTGGAGAATCAGAGTAATAGAACAGAAAACTATGTAGAAGAGTACCCTAAGCTTGAAAGGAAGGCTATATTTGACTATGTGAGCGAGTTTCTGGAGTTCAGATGTAAGCAAGCTTTCATTGGAACATGCAAAGCATGGCCTCGATGGATGATGTCAGTTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTACAAGGAGATGCTGAGTTTTAGAAGCATGGAAGAGATAATGGTGGATGAGCTTGTCACCAGGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGAGACATACTAGCTTATTTGATTAATGAATTGGTTTCAGATTTGTTACCTGTTTAA 2706 0.4106 MEKRRSKGSFLSLFDWNTKSRKKLIWNDPEVSKQGKENVENLQKSQLTRIKVDEIGVSPSNIQSCDFDSTLSVCSDEGCGSKAPGLVARLMGLDSLPASVVTEPSACLSLYGSKSHGVSHCNEGALHSVDDELCPADYINTLLKLEKSSLGSMESRTRKVENLPLKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGILPPKNVAHVMEAAAKIIESSPRPYLRNRTTSTGPSSVPLRILNLKERLEAAQYASVPGKPVNMNKTYPANDKLIERSSNFSKCTSAFKGSRGSEKHSFCNLASKGKPASLAIQAKNNSHGRDTLISNGDMKCMKQKEKNEIKSNQHSRNQKLSTQKAMQQRSCSSRNGNVLGQNNQKQNSMTAQGKLTSKIDSNKLKTRASSSETSGIRKTAIKGTITANIQPKRSITRATGNQKEFQRPKTLFTSRKTKYISSDVCEARGPDNAVNNFGSKIIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPESSSSTEQIMGTRNRIDVHSLEHSDNLYPKKLSLSPPGKHMIDRDALSVLLDKKLQELTSRINLPQCTLATEGSSTGLGSSVQDKVPSVTSTMHKEQDRSLCPDLFSDKLDSIHNSRCTSDDLVLSMNQQLQTSEVSQDPSCSSNSESGNDLVRWYSTAVVGFETPFVSESYLDSEDSAYGSTVYSSMQDEEISSFSQISESVSLESEMKGPEQSPFTLGDGNMTTKQVSNTELEYVQDILGNAEFMAEEFAMGQTSTVIMPNLFDLLENQSNRTENYVEEYPKLERKAIFDYVSEFLEFRCKQAFIGTCKAWPRWMMSVQRKSWMAEELYKEMLSFRSMEEIMVDELVTRDMSSGCGKWLDFDVEAFEEGLEVEGDILAYLINELVSDLLPV 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02320 901 MobiDBLite consensus disorder prediction 335 405 - -
Spst1g02320 901 Pfam DUF761-associated sequence motif 72 100 IPR032795 -
Spst1g02320 901 Pfam Domain of unknown function (DUF4378) 741 893 IPR025486 -
Spst1g02320 901 MobiDBLite consensus disorder prediction 343 405 - -
Spst1g02320 901 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 897 - -
Spst1g02320 901 Coils Coil 776 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02320 Spst-Chr1 31892470 31896072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02320 1 899 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.260 1.62e-109 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02320 - - gmx:100804688 1423.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02320 1 31892470 31896072 Spst10g00004 10 62712 66337 ECH
Spst1g02320 1 31892470 31896072 Spst1g02320 1 31892470 31896072 ECH
Spst1g02320 1 31892470 31896072 Spst10g00004 10 62712 66337 PCT