Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02318 ATGGTACCAAAAAGGAAATATTTTCAGAGGCAACAAGGCGTTGGCAAAGTTCCAATTCAGGACCATAAACGAAGTTATGGTGATACAACACAAGCGTCAATCAGTGGCCTGAGAAATGTGATCAACGCACTATTTACGAGTGACCACTCTTCCAATTTGGAAACTTTTCTGCGAAGAGTGGTAAGAGAGGAGGTGGAAAAAGAAATCCTGGGCCAGGCTCATCTATTTCCAAGAAAAAGGGTTAACGCCGCAGCCAAACCCTTAAAGTTGTGTTTTCTTAATAAGTTACCTGATACAATTTATACTCGATCTAATATAATAGCAGAAGACGGATCACTCCTTCAAATTGCTCTATTTGATGTTAGAACCAAGTCTGTAGTAAATGAGGGTCCTCTTTCTTCACTAAAGATAGAGATCTGCGTTCTGGATGGTGGGTTCGGATCTGATGGCAGTAAAGAGTGGACAGAAGACGAGTTCAATTCCCATATCTTACGTGAAAGAGAAGGTAGAGAGCCACTTTTGATTGGAGAGAGGTTTATTACTCTAAAAAATGGAGTTGCTTGTATCCCTAAAATTGCCATGTCTGACAACTCAAGATGGCAAAGAAGCAGAAGGTTCAGGATTGGAGTCAAATGTGTGCAGCCAACTTCCAATGGAGAAAAGATTCAGGAGGGTAGAAGTGAACCTGTTGTTGTCAAAGATAACAGGGGAGAGACCTATAAGAAACACTATCCTCCATCCTTGGATGATGAATTATGGCGCTTGAAGAATATTGCTAAGGAAGGAAGAATCCACAAGCTGCTTTCTTTACATGGAATTCACAACGTGAAGGATCTCTTGCGGCAGTGCATAACCAACGAACCATCGCTATATAAAATGGTAGGAAACATTGCCAAGAAGTCATGGTTAGCCATCACTGACCATGCCAAAACTTGCGTGATAGATGATTACAAGCTTTACAGCTATCACTCCCTAGAACTGCAAATAGGCCTGCTATTCAATTCCATCTACATCCTTGTGGGAGTTACATTTGATTGGCAAAATTATTATTCACCAGATACTCTCACTCCCGAAGAAAAGTTCCTTCTTCCTTGGCAGCATTTGGTGGAAATAGTGAAGAAGCAAGCTTACAAAAATGTCAACAATATTGTATTGATTGATGAAACTAAATTGAACTGTTTAAATCTGGCTGCATGTCTAAAAGCAAGGCAGTCTGACACTCCAGATCAATATCTGCAACACATGAATATCTCAACTGCACAAGTAACATTCCCAGATTATAGTCAACCATTTATCTCTGCTTCATACACTGATGAAGGAATGCATGACAACCAAGTTTATGCCGATCCACTGACAGGAACAAGAGAAATGCCACAAAACAGTCATGTGTTGGATGAATTATCCCCTGAAATGTACACTGAAGAGGATAGTTGTCACTTTAATGGATCGTGTTTTCCATTCATGCAAGGTGGATATTCAGCAGAGAATGAAGTCTCAGAGACTCAATTCATAGATAGTTGTTCTCCTTATACAACATGGCAACCAGAAACTGGCCTTTTCTTTGGATCTTCTGATGGAGAAGAATTTAACAGTTATTCTACTTTGGTAAATTCTGCTGTGAACATACCAAGTAGTGGCAAACCGAAAGCAGCGTGGTATAAGATTGCTTTTGCTCTCAAATGGGTCATATCAGTGAAAAGGCATGCAGCTGCCAGAAAGAATGCTCAGCTGTTTTATTATAATAACTATTAG 1752 0.4001 MVPKRKYFQRQQGVGKVPIQDHKRSYGDTTQASISGLRNVINALFTSDHSSNLETFLRRVVREEVEKEILGQAHLFPRKRVNAAAKPLKLCFLNKLPDTIYTRSNIIAEDGSLLQIALFDVRTKSVVNEGPLSSLKIEICVLDGGFGSDGSKEWTEDEFNSHILREREGREPLLIGERFITLKNGVACIPKIAMSDNSRWQRSRRFRIGVKCVQPTSNGEKIQEGRSEPVVVKDNRGETYKKHYPPSLDDELWRLKNIAKEGRIHKLLSLHGIHNVKDLLRQCITNEPSLYKMVGNIAKKSWLAITDHAKTCVIDDYKLYSYHSLELQIGLLFNSIYILVGVTFDWQNYYSPDTLTPEEKFLLPWQHLVEIVKKQAYKNVNNIVLIDETKLNCLNLAACLKARQSDTPDQYLQHMNISTAQVTFPDYSQPFISASYTDEGMHDNQVYADPLTGTREMPQNSHVLDELSPEMYTEEDSCHFNGSCFPFMQGGYSAENEVSETQFIDSCSPYTTWQPETGLFFGSSDGEEFNSYSTLVNSAVNIPSSGKPKAAWYKIAFALKWVISVKRHAAARKNAQLFYYNNY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02318 583 PANTHER OS02G0177800 PROTEIN 49 447 IPR012416 GO:0005516
Spst1g02318 583 Pfam Calmodulin binding protein-like N-terminal domain 88 235 IPR046831 -
Spst1g02318 583 Pfam Calmodulin binding protein central domain 247 312 IPR046830 -
Spst1g02318 583 Pfam Calmodulin binding protein C-terminal domain 318 384 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02318 Spst-Chr1 31880544 31883926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02318 51 582 Calmodulin-binding Proteins AT4G25800 30.035 3.03e-83 270