Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02316 ATGGCCAATCTCACGGCTGAGGACGGTGGTCCACTTCAAATTGAGCTGTGGGATCCTGCTTCGCAGCAACGCTTTGACACAGAAGAAGTTTCCACCATGAAGGCTCATATCTATGTGCTGGATGGTGATTTTGGAAACGAGGAGTGGACTGCAGAAGAATTTAAAGCTGGAATTCTGAAACCAAGAGAGGGGAAGGGACCATTACTTAGAGGAGAAACGATTATTAGACTTGTAAAAGGGGTTGGTTTTATCAATAAGAAGATGATGGCGATTACTGATAATTCTCGCAGGACAAGAAGCGGAAAGTTTCGGTTAGGAGTTAAGGTTGAGGAATCTAACTCCCTTGGAGCAGGAATCAGGGAAGCCATAAGTGAACCGTTTAGGGTCAAGGATAGCCCGACCAAGAAACCCGACCGTCCATCATTGAACGATAAGGTGTGGCGTCTGAAGCACATAGGGAAAGGGGGTCCGCTTCACAGGCAGCTTTCTGACAATGGAATAAAAACTGTGAAGGATCTTTTGCGGTTGAACGCAACCGGTTCATTACGAGAGAATTTCGGTAAGATTAATAATTGGGACAAAATCATTGCCCATGGTGAAGATTGTGAGGTAGATGATTATGAGCGCTACAGCTATGAGTATCATGGTATGCAACTTGTCTTCAACTGCATCTATGAGGTTGTGGAGGTGATTTTTCACGGGCAACAACACCCTCGTTCTCTGCAATCTCTGGATTCGCAGGAGAAGTGTTTGGTGGAAAGAGTTAAGAGGGACGCCTACTCAAATCTGCAGTATCTGAAGCCCATTGAGACACAAACACATGGTTCACATCAAGTTCTGCCAGAACGCCTCCTGCCAGCTCAGCAAGGCCCATTACAAACATGGCCATCCACCTCAACATTAAATATTAATGAAGCTGCAAACAATGGCCTTGTGGTAAATCCTGATCCACTCCGAACAATCCTGGGAAAAATGCCACTAAATATGTCTTTTGGGGGCATGGTTGTCCCCGAAGAAGCATGTACTAATATTGATGGAAACGAATGGGATGAAATTCAAAGTTACTTTACTCCTAACCCTAACCCTAACCCTAACCCTAACTCTAACCATAACCAATGGGAGCAACCAATTTATTCCTCCTATGCCTATGGTGATAATGGAGCACCATGTAGCATCATCTTCAACAATTCCACTTTGCTCAACAATTCTGGGTACAAGCCAAGCAAAAGGAAAACCAAGACGGTGTGGCAGAAGATTAGAAATGCTCTGAAATGGCCAAGAGCTTCTGCCCAGAAGTTCACGATGTTCAAACCAAATTACCCACAGTTTTACCCCTTTCGTGGTGACCAACAGATACGTATAGCGTACAGTGCGCACAAAAAGCATATGCAACTGAATGAATTTTGCACACAATCCCAGCAAGATGGCGACGAGAGGGGTGATCGAAAACGGAGACTTGAACGACGCCAAGATTCACAACTTTCGAATCCCTCTGGCACCTTTGGAAGTTTAAGGTATCTCACTGGGAATGACCTGATACCGTCCTTGGCAGATTCATTTCGAAAATCGCTACGAGAGGAGTTGGAACGCCAACTAGTTCCAAGACCAATTAGTAATCAACCTGAAATGTCTGGAGCCTGCAGATTCTTGAAGCTGGTTTTTAGGAATGAGTTGCCTGATACAATCCATACTTTCTCCAAGATCAAAGCTAGAGACGACACTCCTCTCGAGGTTGTTCTTTTTGATATTGAATCTCGGTCTATAGTCTGTGATGAAGATGATCCACTCTCTTCGATCAAGATAGAGATTTGCGTCCTTAATGGTGAGTTTGGTTCAGATGGCAGTGAAAATTGGAGTAACCATGAATTCAACTCCAAAATCTTACGTCAAAGAGACAATAAAGGGCGGTTACTGAAAGGAGATACAGTTATTACGCTTGAAAATGGAGTTGCTTTCATCCACAATTTATCATTCACTGACAACTCATGTTGGATAAGAACACGACAATTCAGGTTAGGAGTCACGGTTGTGAAATCAAATTTGAATGGTGCAATAAACATCAGAGAAGGTATAAGTAAACCTTTCATTGTCAAGGACTCCAGAGTGAATAAGAAAAAGGACCCGTCCCTCAATGATAAAATATGGCATTTGAAACATATATCAAAATATGGTAAAATTTATAAGCAGCTGTCTAAGAATGGGATAGACACAGTCGAGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTACAAGAGAAATTTGGCAAGATTGCCAAAAGGAAACAGGAAGAAATTATGAAGCAGGCTAAGAAAGCAAAGCATGATGAGACTGGTGTTGCTGAAGCCATATTTGATGGAAAAAATTATCAAGCTGAGAATAATACTCTCAACTCCAACCAGAGGAATCTGGTGCAGACTGAGGCAATAAAACATGGTGCTCCAGATGAAGATCTTCAACCGTGTGTCTTCCCAATTGTTCACCAAGAAGAAAACTTATGGCTAATGGACCCACTAAAATGCTTAGCATTTGTCGATGGAAACATAGGATCTGACATGAGTCCTTTGTCCTTTCCCCGTGATGATGAAGCAGAACCTAGCAATCATGCGTCTCTACCCTACCCTGCTTTCTGCATATCAAACAAAGGCAAAAGCAAGATGGTTTGA 2670 0.4281 MANLTAEDGGPLQIELWDPASQQRFDTEEVSTMKAHIYVLDGDFGNEEWTAEEFKAGILKPREGKGPLLRGETIIRLVKGVGFINKKMMAITDNSRRTRSGKFRLGVKVEESNSLGAGIREAISEPFRVKDSPTKKPDRPSLNDKVWRLKHIGKGGPLHRQLSDNGIKTVKDLLRLNATGSLRENFGKINNWDKIIAHGEDCEVDDYERYSYEYHGMQLVFNCIYEVVEVIFHGQQHPRSLQSLDSQEKCLVERVKRDAYSNLQYLKPIETQTHGSHQVLPERLLPAQQGPLQTWPSTSTLNINEAANNGLVVNPDPLRTILGKMPLNMSFGGMVVPEEACTNIDGNEWDEIQSYFTPNPNPNPNPNSNHNQWEQPIYSSYAYGDNGAPCSIIFNNSTLLNNSGYKPSKRKTKTVWQKIRNALKWPRASAQKFTMFKPNYPQFYPFRGDQQIRIAYSAHKKHMQLNEFCTQSQQDGDERGDRKRRLERRQDSQLSNPSGTFGSLRYLTGNDLIPSLADSFRKSLREELERQLVPRPISNQPEMSGACRFLKLVFRNELPDTIHTFSKIKARDDTPLEVVLFDIESRSIVCDEDDPLSSIKIEICVLNGEFGSDGSENWSNHEFNSKILRQRDNKGRLLKGDTVITLENGVAFIHNLSFTDNSCWIRTRQFRLGVTVVKSNLNGAINIREGISKPFIVKDSRVNKKKDPSLNDKIWHLKHISKYGKIYKQLSKNGIDTVEDLLKEHETNPSSLQEKFGKIAKRKQEEIMKQAKKAKHDETGVAEAIFDGKNYQAENNTLNSNQRNLVQTEAIKHGAPDEDLQPCVFPIVHQEENLWLMDPLKCLAFVDGNIGSDMSPLSFPRDDEAEPSNHASLPYPAFCISNKGKSKMV 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02316 889 Pfam Calmodulin binding protein central domain 141 202 IPR046830 -
Spst1g02316 889 Pfam Calmodulin binding protein central domain 709 773 IPR046830 -
Spst1g02316 889 PANTHER OS02G0177800 PROTEIN 491 795 IPR012416 GO:0005516
Spst1g02316 889 MobiDBLite consensus disorder prediction 474 491 - -
Spst1g02316 889 Pfam Calmodulin binding protein C-terminal domain 209 267 IPR046829 -
Spst1g02316 889 MobiDBLite consensus disorder prediction 467 502 - -
Spst1g02316 889 Pfam Calmodulin binding protein-like N-terminal domain 550 699 IPR046831 -
Spst1g02316 889 Pfam Calmodulin binding protein-like N-terminal domain 3 131 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02316 Spst-Chr1 31867220 31875059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02316 504 779 Calmodulin-binding Proteins AT5G26920 32.542 1.49e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02316 - - vra:106757518 404.445