Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02311 ATGGCAACTGAACCAACTTCAACATTCTCTTTGGCTTCTGTGGTTGAAGAGGTTCTTCAACAACATGGTGGTCGGTCAGACGTTAACTCTGCATCAAGAAATGCTGAAGAAACTTCCTTGAGAAGGTATGAAGCAGCTGGTTGGCTACGGAAGACAGTTGGAGTTGTTAAAGGGAAAGACTTGCCGGCTGAGCCCTCTGAAGAAGACTTCAGGATTGGATTGCGTAGTGGGATTATCCTATGCAGTGTTCTTAACAAAATTCAACCTGGATCAGTGCCCAATGTAGTTGAAGGACCTCGTGATTCTGTTATTATTCCTGATGGGGCAGCAGCATTATCTGCATTTCAATACTTTGAAAATGTTAGGAAATTTCTTGCTGTTATGGAGGAAATGGGGCTTCCTACCTTTCAAGTTTCTGATTTGGAACAGGGAGGAAATTCTTCGAGGATAGTGGATTGTGTTCTAGAGCTCAAGTCTTATGCCGAACGAAAACTTGGAGGAGCAAGTGGGTCTGGGAAATATAGCGGGGTTTCCCATGCAAGGCCACCTATCTCTGGGAAACCACTTCAGAGGAAAAACTCAGAACCATTCATGAATTCTTTGTGGACTATGCCATCAGGGGACAGAGATGGTTATATGAGTGATCCCGGACAAGATCGAAGCGAAAAGGGTTCTTTTTCCTTAAATTCACTAGTTCGTCAATATTTGTCTGATAAAAAGCCAGAAGAAATTCCCATTATAGTGGAATCCTTGCTTAGCAAAGTCATGGAGGAATTTGAACATCACATGCAAATCCGACATGAAATGCGTAAAACAACTCAAGTTAAAGCACCATCTGAAACAGATTGTTCAGTTTCAGAACCTGCTTCTATTAGTGAAAGGGAGAAAGAAAAGGAAGATGAACATAATGTACCAGATGATAATGATGCACAAGATGAACATGAGGTACAAGAAGAGCAGGACATTCAAGATGAACACAACGAACAAAATAAACAAGAGGAAAGTAATGAAGGGACGTACAATGAGCATGAAAAAACAAGTCACCAAATTTCGATTTCGAAGCAGCAAAAAATAGTTGAACAACAGAATAGAAGCATCCAGGAATTGAAAAACTCTGTCCGTGAAACAAAATTAGGAATGCAAAATATGCAAAATGAACACCAGAAGGAGATCATTAATCTAAGCAAGCACATACAGAGCCTAGCCTCTGCTGCTTCGGGGTATCATAAAGTTCTTGAAGAAAACCGCAAGTTATACAATGTAGTGCAAGATTTGAAAGGAAATATTAGGGTATACTGTAGAGTCCGACCTTTCTTGGGTGGTCAACCAAGCCATTATAGCTCTGTCGGTAGCGTGGAAGACGGAAGTATCTCAATCATAACACCTTCCAAAAACGGTAAAGAGGGGAAGAAGACATTTACTTTCAATAGAGCATTTGCTCCTACTGCAACCCAAGGTGAAGTTTTCCAGGACACACAACCTCTTATTCGTTCTGTTTTGGACGGTTATAATGTCTGCATATTTGCTTATGGGCAGACGGGATCAGGAAAAACGTTCACTATGTCTGGACCGGATGATCTTAACGAGGAAACCATAGGTGTCAACTATCGTGCACTAGGAGACCTTTTCTATCTCTCAGAGCAAAGGAAAGATACAATTTCTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAACGAGCAAGTTAGGGACCTACTTACGACAGATGAAATCCGCAATAGTTCCCTTAATGGCATCAACGTTCCAGATGCCAACCTTGTTCCGGTTTCATGCACTTCTGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGTGCTGTTGGTTCTACTGCCATGAATGATCGCAGTAGTCGCTCTCACAGCTGTCTTACAGTTCATGTTCAAGGAAAGAACTTGACATCAGGAAGTACTATTCGTGGTAGTATGCATCTGGTTGATCTGGCAGGAAGCGAGAGGGCTGATAAAACTGAGGCTACAGGGGATAGACTTAAGGAGGCTCAACATATCAACAAGTCACTTTCTGCATTGGGAGATGTAATTTCTTCCCTTGCCCAAAAGAGTCCACATGTTCCCTACAGGAATAGCAAACTTACTCAGCTACTTCAAGATTCTCTTGGAGGGCAAGCAAAGACTCTCATGTTTGTTCATATAAGTCCAGAGCCTGAAGCTCTTGGAGAAACACTTAGCACACTCAAGTTCGCTGAACGAGTCTCCAGTGTTGAACTCGGTGCGGCGCGAGTTAATAAAGAGAGTTCAGATGTTAAAGAGCTTAAAGAACAGATTGCTAGTTTGAAGGCAGCCTTAGCGAGAAAGGAAGGAGGAGAAGCAGAAAACTTTCATCAATCTGTGAATAGTAGTGGCAATGAAACACCCAAGTTGAAATCATATTCATCTTCTCCTCCTATTCAACAACGTTCTTCGATTGGCGGTTCTCGTAAGCTAACAAAAGATGATTCTGGTAGCCCGGATAGTCAGAAAAATGTTGCATTACAGTTGAAAAGACGAAGCCTAGATCTCCACGACATGAGTAGCAGCAATTCACAGCCATGGCGACCTGCTACAAGTCCAGGAAAGGAGGATGACAAAGAATCAATTTCTGGAGATTGGGTTGATAAGATTTCCATGAAAAGAAATGACAGCTTGACTAGTGATGACAGTCTCGTGGGACAGTGGGAAGTAGAAAGCAAACAATCTTCTCCAAGGTTAAGTCCCACTTTTCTCTCGGAGACTTCTAAAATATGCCTAGACAACTCCTTGACTAAGAAGGATAGCCTAGACAACTCCTTGAATAAAAAGGATAGCCAAGACAATGAAGATTTACAGAGGCACGGGTTTGACACGACTACCACAGATGAATCAGATGAACACGAAATTGCAACTGTAACTAGTGATTCTTCTGAAGTAGACTTGCATTGGCCAGTACCAATACCTAAACCAATCACCGTTTCAAGTGGATTAGGCATTAAAGCGAAGAAAAAAACTAATCTCAGATCAATAAAGAACACAGATAGCAGGTAA 3042 0.4165 MATEPTSTFSLASVVEEVLQQHGGRSDVNSASRNAEETSLRRYEAAGWLRKTVGVVKGKDLPAEPSEEDFRIGLRSGIILCSVLNKIQPGSVPNVVEGPRDSVIIPDGAAALSAFQYFENVRKFLAVMEEMGLPTFQVSDLEQGGNSSRIVDCVLELKSYAERKLGGASGSGKYSGVSHARPPISGKPLQRKNSEPFMNSLWTMPSGDRDGYMSDPGQDRSEKGSFSLNSLVRQYLSDKKPEEIPIIVESLLSKVMEEFEHHMQIRHEMRKTTQVKAPSETDCSVSEPASISEREKEKEDEHNVPDDNDAQDEHEVQEEQDIQDEHNEQNKQEESNEGTYNEHEKTSHQISISKQQKIVEQQNRSIQELKNSVRETKLGMQNMQNEHQKEIINLSKHIQSLASAASGYHKVLEENRKLYNVVQDLKGNIRVYCRVRPFLGGQPSHYSSVGSVEDGSISIITPSKNGKEGKKTFTFNRAFAPTATQGEVFQDTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDDLNEETIGVNYRALGDLFYLSEQRKDTISYEISVQMLEIYNEQVRDLLTTDEIRNSSLNGINVPDANLVPVSCTSDVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGKNLTSGSTIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLAQKSPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETLSTLKFAERVSSVELGAARVNKESSDVKELKEQIASLKAALARKEGGEAENFHQSVNSSGNETPKLKSYSSSPPIQQRSSIGGSRKLTKDDSGSPDSQKNVALQLKRRSLDLHDMSSSNSQPWRPATSPGKEDDKESISGDWVDKISMKRNDSLTSDDSLVGQWEVESKQSSPRLSPTFLSETSKICLDNSLTKKDSLDNSLNKKDSQDNEDLQRHGFDTTTTDESDEHEIATVTSDSSEVDLHWPVPIPKPITVSSGLGIKAKKKTNLRSIKNTDSR 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02311 1013 MobiDBLite consensus disorder prediction 930 983 - -
Spst1g02311 1013 Gene3D - 32 164 IPR036872 -
Spst1g02311 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 428 780 IPR027417 -
Spst1g02311 1013 SMART kinesin_4 426 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 MobiDBLite consensus disorder prediction 269 364 - -
Spst1g02311 1013 Coils Coil 755 782 - -
Spst1g02311 1013 SUPERFAMILY Calponin-homology domain, CH-domain 32 167 IPR036872 -
Spst1g02311 1013 SMART ch_5 41 160 IPR001715 GO:0005515
Spst1g02311 1013 ProSitePatterns Kinesin motor domain signature. 648 659 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst1g02311 1013 Coils Coil 352 386 - -
Spst1g02311 1013 MobiDBLite consensus disorder prediction 320 350 - -
Spst1g02311 1013 ProSiteProfiles Kinesin motor domain profile. 428 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 Pfam Calponin homology (CH) domain 42 162 IPR001715 GO:0005515
Spst1g02311 1013 PRINTS Kinesin heavy chain signature 502 523 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 PRINTS Kinesin heavy chain signature 649 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 PRINTS Kinesin heavy chain signature 698 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 PRINTS Kinesin heavy chain signature 618 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 ProSiteProfiles Calponin homology (CH) domain profile. 39 162 IPR001715 GO:0005515
Spst1g02311 1013 MobiDBLite consensus disorder prediction 933 970 - -
Spst1g02311 1013 MobiDBLite consensus disorder prediction 167 226 - -
Spst1g02311 1013 Pfam Kinesin motor domain 434 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g02311 1013 MobiDBLite consensus disorder prediction 289 310 - -
Spst1g02311 1013 Gene3D Kinesin motor domain 423 789 IPR036961 -
Spst1g02311 1013 MobiDBLite consensus disorder prediction 786 822 - -
Spst1g02311 1013 FunFam Kinesin-like protein KIN-14I isoform A 423 790 - -
Spst1g02311 1013 MobiDBLite consensus disorder prediction 847 879 - -
Spst1g02311 1013 Coils Coil 316 336 - -
Spst1g02311 1013 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 937 IPR027640 GO:0003777|GO:0007018
Spst1g02311 1013 CDD KISc_C_terminal 426 750 - -
Spst1g02311 1013 CDD CH_AtKIN14-like 41 159 - -
Spst1g02311 1013 MobiDBLite consensus disorder prediction 781 835 - -
Spst1g02311 1013 MobiDBLite consensus disorder prediction 863 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02311 Spst-Chr1 31806320 31811841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02311 416 787 Calmodulin-binding Proteins AT5G65930 39.842 3.14e-75 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02311 K10406 - gmx:100799535 1533.08