Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02309 ATGAGTAGGACTGAATTATCGAGGTCCAAGCCACCGGCGGTTCCTTTGGGAACTCTGATTGGCCGTGAGATTCGAAATGAAAAAGTTGAAAAACCTTTCGTGAAGTATGGACAAGCTGGATTGGCCAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGCCTCAGGGTTCCTGGGGATGCATCGACGGCGTTTTCTGTCTTTGCGATCTTTGATGGGCATAACGGGATATCAGCTGCTATTTTTGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCCCAAGATATTAGCAGGGATGCATGGCTTCAGGCCCTTCCTCGCGCACTGGTTGTTGGTTTTGTGAAGACTGACATAGAGTTTCAGCAAAAGGGGGAAACTTCCGGAACAACAGCTACATTTGTTTTGGTTGATGGATGGACTATAACTGTTGCATCTGTTGGGGATTCACGCTGCATATTAGATACTCAGGGAGGTGTTGTTTCTCTCTTGACAGTTGATCACAGACTGGAAGAGAATGCAGAGGAAAGGGAGCGTGTGACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAACGAG 600 0.4583 MSRTELSRSKPPAVPLGTLIGREIRNEKVEKPFVKYGQAGLAKKGEDYFLIKTDCLRVPGDASTAFSVFAIFDGHNGISAAIFAKENLLSNVLSAIPQDISRDAWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02309 200 SUPERFAMILY PP2C-like 38 191 IPR036457 -
Spst1g02309 200 ProSiteProfiles PPM-type phosphatase domain profile. 32 200 IPR001932 -
Spst1g02309 200 PANTHER PROTEIN PHOSPHATASE 46 192 IPR015655 GO:0004722|GO:0006470
Spst1g02309 200 CDD PP2Cc 43 199 IPR001932 -
Spst1g02309 200 Gene3D - 33 200 IPR036457 -
Spst1g02309 200 SMART PP2C_4 23 197 IPR001932 -
Spst1g02309 200 Pfam Protein phosphatase 2C 63 192 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02309 Spst-Chr1 31801931 31803118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02309 1 200 PP2C-type Phosphatase Gene Family AT1G09160 84.000 9.96e-121 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02309 - - gmx:100800232 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02309 1 31801931 31803118 Spst1g02309 1 31801931 31803118 ECH