Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02250 ATGACATCGTTCTTGAAGCCTGAGAATGCTCTCAAAAGGGCTGAAGAGTTGATCAACGTTGGGCAGAAGCAGGATGCTTTGCAGACTCTTCATGACCTCATTACCTCAAAGAGATATAGAGCATGGCAAAAGACACTTGAAAGGATTAGGTTCAAGTATGTTGAACTTTGTGTGGACATGCGCAAAGGACGGTTTGCTAAAGATGGGCTTATTCAATACAGAATAATTTGTCAACAGGTCAATGATAGTTCACTTGAAGAGGTTATTAAACACTTTATGCACCTCTTGAGAAAGCTGAACAAGCCCGAAGCCAAGCACAGGCAAGCACTTGATGTCGATGATTTAGAGGCTGATAAAAGGCCGGAGGATTTGATGTTGAGCTATGTCAGTGGGGAGAAAGGAAAGGACAGATCTGATCGAGAGCTTGTTACCCTATGGTTTAAATTTCTTTGGGAGACATACAGGACAGTGTTAGAATCGCGCAGCGGAATGTTCGCGTGGTCGGACAAAAACCAAGAGGGGGGGTGA 528 0.4413 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIRFKYVELCVDMRKGRFAKDGLIQYRIICQQVNDSSLEEVIKHFMHLLRKLNKPEAKHRQALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTLWFKFLWETYRTVLESRSGMFAWSDKNQEGG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02250 175 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 159 IPR027512 GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02250 Spst-Chr1 31051662 31052337 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02250 1 159 Eukaryotic Initiation Factors Gene Family AT4G11420 77.576 7.84e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02250 K03254 - gmx:100782598 275.018