Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g02233 | ATGCTGTTAAAGCATTCGTTGCTAACGCATAGATCCAACTTCAGATTTTCCCGAGAAACTCGCATTTTCCGGGGAAGAAACTCCACGAATTCCTACATGGCGCCTCCAATCCTCTCCATCGCCCTTCCCTCCGACACCGGTCGAGTTCTCAGCATTCAATCTCACACCGTTCAGGGGTATGTTGGCAATAAATCAGCTGTCTTCCCCCTGCAACTACTGGGCTACGATGTGGATCCAATTAATTCCGTGCAGTTTTCAAACCATACAGGATATCCGTCGTTTAAGGGCCAGGTTTTGAATGGACAGCAACTCTGGGAGCTAATAGAAGGCCTTGAAGGAAATGAATTGTTGTTCTATACTCACTTGTTAACAGGTTATATCGGTTCAGAGTCTTTTCTAAACACTGTATTGCAGGTCGTCAACAAACTTCGGTCAATAAACCCAGGGCTTACATATGTATGTGATCCAGTGATGGGTGATGAAGGAAAGCTTTATGTTCCCAAAGAGCTAGTCTCAGTCTATCGTGAGAAGGTTGTTCCAGTAGCTTCAATGTTGACCCCCAACCAGTTTGAGGCAGAACTACTGACAGGTTTCAGGATTCAGTCAGAAGAACATGGTCGAGAGGCCTGTAGGCTTCTCCATGCAGCTGGGCCTTCAAAGGTCATAATTACAAGTATAAATATTGACGGGAATCTTCTTCTCATTGGCAGTCATCAAAAAGAAAAGGGAACAGGAGATCTCATGACTGCACTTCTTCTTGCAGTGCGTCGTGACTGGCTCCAAAAACGCTATAGGGAGATAGCAAATAACAGCAGCTCAGCCATCATGCCCGCCATTCAACCCGTCTTTGGGTCTGCTACATTAAACTGTTCCGCAACAGCAGCTCCTGTAGCGGGCAGGACACCCTATGAGACAATCTTGAGGTTGCAGCAGAACTTGCAGTTTCAAGCTTGCAGTTTTGGATTAGTAAACTATCATTCAGATAATGAACAGATCAAGGTTCACCAATATGTGCAGGCAGTTTTGCACAGGACGCTCAGTGACTACAAAAGCGCGGGACATGATTCCGAGTCAACCAGTTTAGAGATCAGATTAATTCAAATTCTCCTCTCTCTTGCTGTGATCATGGGTTGCTGCTTTAGTGCTCCTCCAAAGATCAAAGCCGAGAGCCCTCCACGTAATGGTTTGAATTCATGGGATGGTTGCAAAGAAGATAATGATTTGAGTGGTTTAAGCGGCAAGGTGTCTTCATCTATGCTTGTAACTCCTCAGAGTGAGGTTGAGATATTGGAGGCCAGCAATTTGAAGAACTTCGCATTCAATGAGCTAAGAACTGCTACCAGGAACTTTCGTCCAGATAGTTTGGTGGGTGAAGGTGGCTTTGGTTGCGTGTTTAAAGGGTGGATTGATGAGCAGACACTTGCCCCTACTAAAGCAGGGACAGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAAGCAACCAGGGACACACTGAATGGTTGACAGAAATTAACTACCTGGGACAGCTGAGTCATCCTAATCTTGTGAAGCTAATTGGTTACTCCTTAGAGGATGATCACCGGATTCTGGTGTATGAATTTGTGGCCAAGGGTAGCTTGGATAATCACCTGTTTAGGAGGGCTTCTTACATTCAACCACTCTCTTGGAACATCCGTATGAAGATTGCTCTTGATGCCGCTAAAGGTCTTGCATTTCTTCACAGTGATGAAGTAGATGTAATATATAGGGACTTCAAAACTTCTAATATCTTACTTGATTCTAATTATAACGCAAAACTCTCTGATTTTGGGTTGGCAAAAAATGGACCAGAAGGTGATAAGAGCCATGTTTCTACAAGGGTAATGGGCACCTTCGGCTACGCAGCTCCTGAGTATATTGCCACAGGTCACCTAACCAAAAAGAGTGACATATACAGTTTTGGAGTTGTTCTTCTGGAACTTATGTCAGGAAAACGTGCACTGGATAACAACAGGCCAAATGGGGAACATAATTTAGTTGAATGGGCCAAACCACTCCTCATAAACAAACACAAGATCTCCCAAGTCATGGATGCACGCATAGAAGGCCAATATTCAAAGCAAGAAGCAAAGAGAATAGCTCACATTGCAATTCAATGCTTATCGACAGAACAAAAAGTTAGACCAAACATAGATTATGTGGTGAGATCATTGGAACATCTTCAGGACTCCATTGACACACAAGTAAATGGCCATTGCTCAAGCAGCAGTGGTACTCCTAATCCAAGTTTGTCTCCTTCTCCTCTTCGTACATAG | 2298 | 0.4413 | MLLKHSLLTHRSNFRFSRETRIFRGRNSTNSYMAPPILSIALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPSFKGQVLNGQQLWELIEGLEGNELLFYTHLLTGYIGSESFLNTVLQVVNKLRSINPGLTYVCDPVMGDEGKLYVPKELVSVYREKVVPVASMLTPNQFEAELLTGFRIQSEEHGREACRLLHAAGPSKVIITSINIDGNLLLIGSHQKEKGTGDLMTALLLAVRRDWLQKRYREIANNSSSAIMPAIQPVFGSATLNCSATAAPVAGRTPYETILRLQQNLQFQACSFGLVNYHSDNEQIKVHQYVQAVLHRTLSDYKSAGHDSESTSLEIRLIQILLSLAVIMGCCFSAPPKIKAESPPRNGLNSWDGCKEDNDLSGLSGKVSSSMLVTPQSEVEILEASNLKNFAFNELRTATRNFRPDSLVGEGGFGCVFKGWIDEQTLAPTKAGTGMVIAVKRLNQESNQGHTEWLTEINYLGQLSHPNLVKLIGYSLEDDHRILVYEFVAKGSLDNHLFRRASYIQPLSWNIRMKIALDAAKGLAFLHSDEVDVIYRDFKTSNILLDSNYNAKLSDFGLAKNGPEGDKSHVSTRVMGTFGYAAPEYIATGHLTKKSDIYSFGVVLLELMSGKRALDNNRPNGEHNLVEWAKPLLINKHKISQVMDARIEGQYSKQEAKRIAHIAIQCLSTEQKVRPNIDYVVRSLEHLQDSIDTQVNGHCSSSSGTPNPSLSPSPLRT | 765 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g02233 | 765 | Gene3D | Phosphorylase Kinase; domain 1 | 425 | 535 | - | - | |
Spst1g02233 | 765 | CDD | STKc_IRAK | 456 | 735 | - | - | |
Spst1g02233 | 765 | PANTHER | OS01G0588500 PROTEIN-RELATED | 409 | 736 | - | - | |
Spst1g02233 | 765 | ProSiteProfiles | Protein kinase domain profile. | 450 | 735 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g02233 | 765 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 581 | 593 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g02233 | 765 | CDD | pyridoxal_pyridoxamine_kinase | 48 | 254 | IPR004625 | GO:0008478|GO:0009443 | |
Spst1g02233 | 765 | Gene3D | Transferase(Phosphotransferase) domain 1 | 536 | 750 | - | - | |
Spst1g02233 | 765 | MobiDBLite | consensus disorder prediction | 742 | 765 | - | - | |
Spst1g02233 | 765 | ProSitePatterns | Protein kinases ATP-binding region signature. | 456 | 488 | IPR017441 | GO:0005524 | |
Spst1g02233 | 765 | NCBIfam | pyridoxal kinase | 48 | 227 | IPR004625 | GO:0008478|GO:0009443 | |
Spst1g02233 | 765 | FunFam | Serine/threonine-protein kinase PBS1 | 536 | 750 | - | - | |
Spst1g02233 | 765 | Gene3D | - | 44 | 374 | IPR029056 | - | |
Spst1g02233 | 765 | SUPERFAMILY | Ribokinase-like | 47 | 255 | IPR029056 | - | |
Spst1g02233 | 765 | Pfam | Protein tyrosine and serine/threonine kinase | 455 | 732 | IPR001245 | GO:0004672|GO:0006468 | |
Spst1g02233 | 765 | FunFam | Serine/threonine-protein kinase BIK1 | 417 | 535 | - | - | |
Spst1g02233 | 765 | Pfam | Phosphomethylpyrimidine kinase | 124 | 228 | IPR013749 | - | |
Spst1g02233 | 765 | SUPERFAMILY | Protein kinase-like (PK-like) | 432 | 734 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g02233 | Spst-Chr1 | 30783219 | 30798491 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g02233 | 436 | 744 | Glycoside Hydrolase | AT3G07070 | 48.232 | 1.66e-94 | 299 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Spst1g02233 | PK_Tyr_Ser-Thr | 1.9e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g02233 | - | - | var:108326804 | 699.893 |