Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02211 ATGTGTGTAGAGTTTTTTTGGTTGCTCCGCCTAGTGATGGCCAAAACCAAAACACTTGTGCTTCCTCTCTGTGTTTTGACCATTCTGGTCACAAACATTGCAAAGTCTCAAGAGTTTGTCTTCAACGGGTTTGGTGGTGCTTCTGCCACCAACATAGCCTTAAACGGAGGTGCAGTGATTGAGCACAGGGGCTTGCTTCGTTTAACAAACGATACTCAGAGAGTAATCGGGCATGCGTTTTATCCAACACCAATTCAGTTCAAGCACAATAACAAAAGTTCTCCCACCGACGCAAAACTTTTCTCCTTTTCCACTGCTTTTGCGTTTGCAATCCTCCCACAGCACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCACGTCGCTCGCGGACGCGTACCCGAGTCAGTACTTGGGCCTCCTGAACCCAAACGATGTGGGGAATTTCTCAAACCACCTTTTCGCAGTGGAATTCGACACCGTCCAAGACTTCGAATTCGAGGACATCAATGACAATCATGTCGGTGTCAATCTCAACAACATGGTCTCCAACAAATCTGTTGAAGCTGCGTTTTTCCCTGAGGACTCATCAAATAAGCAAAACCTGAATTTGAAGAGTGGTAAAGTCACACAAGCATGGGTTGATTATGATTCATCAAAGAACCAATTGGAAGTTCGACTCTCCCCAACTTCCTCCAAACCCACTTACCCAATTTTATCATACAAAGTAGATCTCTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTTCTTCAACAGGGTTACTCGCAAGCACACACTATATATTCGGTTGGAGCTTCAAAATAAACGGAGAGGCCGAAACCCTTTCCTTACACAATCTCCCATCTCTCTCTGCCTCTAATCAAACTCAAAAGCACTTAATCTTAGGACTCTCACTTTCATTGATTCTAACACTCGCCACAGTTTCTCTGGCGTGTTACCTCTTCAGAAGGATGAAGAACACCGAAGTAATCGAAGTTTGGGAGATGGACGTTGTTGGGCCCCACAGATTCCCATACAAAGAGCTACACAAAGCCACGAAAGGCTTCAAGGACAAGAACCTGCTCGGGTTCGGAGGGTTCGGTCGCGTCTACAAAGGGGTGCTCCCAAAGTCCCACATTGAAATCGCCGTGAAGCGAATTTCGCCCGAATCGAAACAAGGTATGCAGGAGTTTGTGTCGGAAGTATCAACCACAGGAAGACTCCGACATAGGAACCTCGTACAGTTACTAGGTTGGTGTCGGAAACAAAACGACCTTTTACTTGTATACGATTTCATGCGAAATGGAAGCTTGGACAAATACTTGTTCGATCAACCAAGGAAAATTCTGACATGGGAGGAAAGGTTTAAGATAATAAAAGGAGTGGGTTCGGGGTTGGTGTATTTGCATGAGGAGTGGGAACAAACGGTGATTCACAGAGACGTGAAGGCAGGGAACGTTTTGTTGGATAGCGACATGAATGGGAGGTTGGGGGATTTTGGGTTGGCGAAGCTTTATGAGCATGGTGCCAACCCTAGGACCACGCGTGTGGTGGGAACGCTGGGGTATCTAGCACCGGAGCTCACACGAACGGGGAAACCCACCACGGCTTCTGATGTTTACGCGTTCGGGGCGTTGTTGTTGGAGGTGGTGTGTGGGAGGAGGCCCATCGAGGTGAAGGCGTTGCCGGAGGAGCTGATACTAGTGGAGTGGGTGTGGGAGCAGTGGCGCGTGGGGGAGCCCCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGATGTGGAAGTTTTGATGGTCATCAAAGTGGGGTTGTTGTGTTCCGCGGAGGCCCCGGAGGAGAGGCCCAGCATGAGGCAGGTGGTGAGGTACTTGGAACGGGAGGTGGCTGCGCCGCCAGTGGTGTACGTGAAAAAGGAAGGTGGTGTTGGTGGTGGCGGCTGCTATGGGGAGTTGCATTCGTACTCGACGTGGTCATCGGTGGGTGATGACGTGGCGTCATCTCTTTCACTTTCCGGTGGCCGGTAG 2049 0.4988 MCVEFFWLLRLVMAKTKTLVLPLCVLTILVTNIAKSQEFVFNGFGGASATNIALNGGAVIEHRGLLRLTNDTQRVIGHAFYPTPIQFKHNNKSSPTDAKLFSFSTAFAFAILPQHPKLGGHGFAFTISRSTSLADAYPSQYLGLLNPNDVGNFSNHLFAVEFDTVQDFEFEDINDNHVGVNLNNMVSNKSVEAAFFPEDSSNKQNLNLKSGKVTQAWVDYDSSKNQLEVRLSPTSSKPTYPILSYKVDLSPILQDSMYVGFSSSTGLLASTHYIFGWSFKINGEAETLSLHNLPSLSASNQTQKHLILGLSLSLILTLATVSLACYLFRRMKNTEVIEVWEMDVVGPHRFPYKELHKATKGFKDKNLLGFGGFGRVYKGVLPKSHIEIAVKRISPESKQGMQEFVSEVSTTGRLRHRNLVQLLGWCRKQNDLLLVYDFMRNGSLDKYLFDQPRKILTWEERFKIIKGVGSGLVYLHEEWEQTVIHRDVKAGNVLLDSDMNGRLGDFGLAKLYEHGANPRTTRVVGTLGYLAPELTRTGKPTTASDVYAFGALLLEVVCGRRPIEVKALPEELILVEWVWEQWRVGEPLAVVDPRLGGAFDDVEVLMVIKVGLLCSAEAPEERPSMRQVVRYLEREVAAPPVVYVKKEGGVGGGGCYGELHSYSTWSSVGDDVASSLSLSGGR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02211 682 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Spst1g02211 682 ProSiteProfiles Protein kinase domain profile. 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02211 682 Gene3D - 35 310 - -
Spst1g02211 682 CDD lectin_legume_LecRK_Arcelin_ConA 38 283 IPR001220 GO:0030246
Spst1g02211 682 FunFam Lectin-domain containing receptor kinase A4.3 347 438 - -
Spst1g02211 682 SMART serkin_6 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02211 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Spst1g02211 682 Gene3D Transferase(Phosphotransferase) domain 1 439 645 - -
Spst1g02211 682 SUPERFAMILY Protein kinase-like (PK-like) 346 637 IPR011009 -
Spst1g02211 682 FunFam L-type lectin-domain containing receptor kinase S.4 35 287 - -
Spst1g02211 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 285 IPR013320 -
Spst1g02211 682 PANTHER - 58 636 - -
Spst1g02211 682 Pfam Protein kinase domain 362 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02211 682 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Spst1g02211 682 CDD STKc_IRAK 368 634 - -
Spst1g02211 682 FunFam L-type lectin-domain containing receptor kinase S.4 439 644 - -
Spst1g02211 682 Pfam Legume lectin domain 37 293 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02211 Spst-Chr1 30501720 30503768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02211 37 642 Receptor kinase-like Gene Family AT3G55550 61.338 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst1g02211 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02211 - - gmx:100787552 1078.54