Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02194 ATGGCTGGGATTTGCTGTGGAGTTGTTGGTGAAGGTGAAACTTCTACTCCTCTTGAACCACCATCTCGTCCTTCCAGGCGCCGAAGTATGGACATCTTGCCCTTGAAGTACATCGCTGACATGGCCGTGCCCGAGTCTTCTCGGAAGAGCCCCAAGCTCGATCTTACCGACCACGAGAATCAACTTCAAACTCGTCAGGAATCCTCCGGAACCAAGGTTATGACGAAGGATTCCGAATTCGTCAACGAAGAAGACGACGACGTTTCCGACTCTAAGTCCCTCACAGATGATGACTCTTCCGAAGATGAAGAGTGTCCCAAGTTCGGCGTCACCTCCGTCTGCGGTAGGAGGAGGGACATGGAGGACTCTGTTTCCCTGCGCCCTTTCTTCTCGCTCGAAGGCTTCCACTACTTCGGCGTTTTCGACGGTCACGGTTGCTCACATGTTGCGACTATGTGCAAGGAGCGGCTTCACGAGATTGTGAACGAAGAGATTCTCGACGGGGACGAGAATTTTGAGTGGAAATCGATGATGCAGAGCGGCTTCGCTCGCATGGACCAAGAGGTTTTCAGCCAGAGCCAGGGCAACCAGACTTTCAACTGCAGGTGCGAGCTCCAGACTCCGCACTGCGACGCCGTCGGATCCACTGCTGTCATCGCCATCCTCACTCCGGACAAAATCGTCGTCTCCAACTGTGGCGACTCCCGCGCTGTCCTCTGTCGTAACGGAGTCGCCATCCCTCTCTCCTCTGATCACAAGCCGGATCGTCCCGACGAATTGCTCCGTGTGGAATCCAAAGGAGGGCGCGTGATTTACTGGGACGGCCCGAGAGTGCTGGGTGTGTTGGCCATGTCTCGAGCCATAGGTGACTACTACCTGAAGCCGTTCGTGATTTCCGAGCCCGAGGTGACGGTGACCGAACGAAGTGATGAAGATGAGTGTTTGATACTGGCGAGTGATGGACTCTGGGATGTGGTCTCGAATGAAACTGCTTGTGGGGTGGTGAAGATGTGCCTGAAGTCGCAGAAGCCACCAACGCCCCCCGGGTCTCCGGGGGGTTACGTGACGGCAGACGGATCCGACCGCGCTTGCTCTGATGCCTCTATTCTGTTGACTAAGTTGGCTTTAGCAAGGCACAGTGCGGATAATGTGAGCGTGGTGGTGATTGATTTGAGGAAGGATCAGGGACTAGCCGCCACTTCCGCCTCCAACTACCTGAACTAA 1224 0.5523 MAGICCGVVGEGETSTPLEPPSRPSRRRSMDILPLKYIADMAVPESSRKSPKLDLTDHENQLQTRQESSGTKVMTKDSEFVNEEDDDVSDSKSLTDDDSSEDEECPKFGVTSVCGRRRDMEDSVSLRPFFSLEGFHYFGVFDGHGCSHVATMCKERLHEIVNEEILDGDENFEWKSMMQSGFARMDQEVFSQSQGNQTFNCRCELQTPHCDAVGSTAVIAILTPDKIVVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVESKGGRVIYWDGPRVLGVLAMSRAIGDYYLKPFVISEPEVTVTERSDEDECLILASDGLWDVVSNETACGVVKMCLKSQKPPTPPGSPGGYVTADGSDRACSDASILLTKLALARHSADNVSVVVIDLRKDQGLAATSASNYLN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02194 407 CDD PP2Cc 107 391 IPR001932 -
Spst1g02194 407 MobiDBLite consensus disorder prediction 80 103 - -
Spst1g02194 407 Pfam Protein phosphatase 2C 108 383 IPR001932 -
Spst1g02194 407 FunFam Probable protein phosphatase 2C 9 101 395 - -
Spst1g02194 407 ProSiteProfiles PPM-type phosphatase domain profile. 107 391 IPR001932 -
Spst1g02194 407 MobiDBLite consensus disorder prediction 1 107 - -
Spst1g02194 407 SUPERFAMILY PP2C-like 107 392 IPR036457 -
Spst1g02194 407 MobiDBLite consensus disorder prediction 62 76 - -
Spst1g02194 407 SMART PP2C_4 95 389 IPR001932 -
Spst1g02194 407 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Spst1g02194 407 Gene3D - 102 398 IPR036457 -
Spst1g02194 407 PANTHER PROTEIN PHOSPHATASE 84 391 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02194 Spst-Chr1 30391351 30392875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02194 42 393 PP2C-type Phosphatase Gene Family AT2G29380 56.474 4.14e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02194 K14497 - gmx:100776356 615.15