Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02151 ATGTCGGATGCTTTGATCAATGGACTGGCCGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATACCCACTTTCAACTGTTAACACTCGTCAACAAACCGAGCGTGATCCGAAGAGAGACACGAGGAGTCAAGGCGCCCTCGAACGAATGTGCCAGGTTGTAAAAGAAGAAGGGTGGGAACGGTTGTATGGAGGTTTGATGCCATCTCTGGTGGGTACAGCTGCGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAAGGCTGAAGCAGCTGCTTTACAACAAAAGAAAATGGGTCTCGGTGATGGATCAGTTGGGATGCTTTCCTCACTTCTTACTGCTGCTTTATCTGGGTGTGTAAACGTGCTCTTGACAAATCCCATTTGGGTAGTTGTTACCCGTATGCAGGCACATAGACAAGAGTCAAACCATGCACCTGATCAGAGTTTGTTCGTTGCCACTGAGCAAGCAATTATTTCTGCTGTTGAACCTCATCCTTATGAAACTAGCCATGTGATTCGAGAAATCTTTGATGAAGCTGGTATTTGGGGTTTCTGGAAAGGTGTATTACCAACACTGATCATGGTAAGCAATCCTGCCATACAGTTCATGCTGTATGAAGCCATGCTGGAAAAGTTAAGAAAAAGACGTAATAGCAACAGGGTAACTGCTTTAGAGATATTTCTTCTCGGAGCTTTAGCTAAGCTTGGAGCTACTGTTGTAACTTATCCGCTCCTAGTTGTAAAGGCAAGGCTCCAGGCTAGACAGGATAAAACAGGAGACAGGAGGCACCATTACAAAGGTACTTGGGATGCCATTATTAAAATGATCCGATATGAAGGGTTGAATGGTTTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTTGCAGCTGCTGTTATATTCACGATAAAAGAAGAACTAGTTAGGGGGGTTCAGTTCTTGCTTGCCAAGGATGCTGCCAACACTGTAAAGCTAAAGCATTCGTGA 1008 0.4425 MSDALINGLAGAGGGIIAQLITYPLSTVNTRQQTERDPKRDTRSQGALERMCQVVKEEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNKAEAAALQQKKMGLGDGSVGMLSSLLTAALSGCVNVLLTNPIWVVVTRMQAHRQESNHAPDQSLFVATEQAIISAVEPHPYETSHVIREIFDEAGIWGFWKGVLPTLIMVSNPAIQFMLYEAMLEKLRKRRNSNRVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQDKTGDRRHHYKGTWDAIIKMIRYEGLNGFYKGMGTKIVQSVLAAAVIFTIKEELVRGVQFLLAKDAANTVKLKHS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02151 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Spst1g02151 335 Gene3D Mitochondrial carrier domain 9 321 IPR023395 -
Spst1g02151 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 216 IPR018108 -
Spst1g02151 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
Spst1g02151 335 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 319 IPR044712 GO:0006862|GO:0055085
Spst1g02151 335 SUPERFAMILY Mitochondrial carrier 3 313 IPR023395 -
Spst1g02151 335 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Spst1g02151 335 Pfam Mitochondrial carrier protein 109 219 IPR018108 -
Spst1g02151 335 Pfam Mitochondrial carrier protein 227 316 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02151 Spst-Chr1 29778218 29782775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02151 24 316 Chloroplast and Mitochondria Gene Families AT1G25380 28.188 1.55e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02151 K13354 - gmx:100775784 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02151 1 29778218 29782775 Spst1g02151 1 29778218 29782775 ECH