Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g02130 | ATGGCGTCGAAACTCACGAAAGCGCAGAAGAAGATAGCGTACGATGCCAAACTGTGTCGGCTTCTGGATAACTACACCCAAATTCTGGTCGTGGCTGCGGACAACGTGGGATCCAACCAGCTTCAGAACATTCGACAGGGCCTACGTGGCGACTCCGTGGTCCTCATGGGAAAGAACACCATGATGAAACGCTCTGTTAAACTCCATGCCGAGAGAACCGGCAACGATGCCTTCCTCAACCTTATTCCTCTTCTAGTCGGTAATGTGGGGTTGGTTTTCACCAAAGGTGACGTGAAAGAGGTTAGCGAAGTGATTGGCAAGTACAAGGTGGGAGCTCCTGCTCGTGTTGGGTTGATTGCACCTATTGATGTTGTTGTTCCGCCAGGCAACACAGGGTTGGATCCCTCTCAAACTTCTTTCTTCCAGGTGCTTAACATACCTACCAAGATTAACAAGGGTACTGTGGAAATTATCACCCCTGTGGAACTCATTAGGAAGGGTGAGAAGGTGGGGTCTTCTGAAGCTGCATTGCTTTCGAAGCTTGCGATAAGGCCCTTCTCCTATGGGCTTGTTGTGGTTTCTGTTTATGACAATGGTTCGGTGTTTAGCCCTGAGGTTCTTGACCTCACTGACGATGACCTCCTTAATATGTTTGCTGCTGGTGTCTCCATGGTCTCTTCACTGTCCTTGGCTATCTCGTACCCAACAATTGCAGCTGCACCACACATGTTTGTCAATGCCTATAAGAACGTCCTCTCTGTTGCAGTGGCCACAGAATATTCGTTCCCCCAGGCTGACGAGGTTAAGGAGTACCTGAAGGATCCTAGTAAATTTGCAGTAGCTGTTGCCGCCGCACCTGATACTGGTTCTGCTCCAGCCGATGCCGCCAAGGAGGAGGAAAAGAAGGAAGAACCAGAAGAATCTGACGATGACATGGGCTTTAGTTTGTTTGATTAA | 957 | 0.4922 | MASKLTKAQKKIAYDAKLCRLLDNYTQILVVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRSVKLHAERTGNDAFLNLIPLLVGNVGLVFTKGDVKEVSEVIGKYKVGAPARVGLIAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGEKVGSSEAALLSKLAIRPFSYGLVVVSVYDNGSVFSPEVLDLTDDDLLNMFAAGVSMVSSLSLAISYPTIAAAPHMFVNAYKNVLSVAVATEYSFPQADEVKEYLKDPSKFAVAVAAAPDTGSAPADAAKEEEKKEEPEESDDDMGFSLFD | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g02130 | 318 | CDD | Ribosomal_P0_L10e | 9 | 185 | - | - | |
Spst1g02130 | 318 | FunFam | 60S acidic ribosomal protein P0 | 113 | 186 | - | - | |
Spst1g02130 | 318 | MobiDBLite | consensus disorder prediction | 303 | 318 | - | - | |
Spst1g02130 | 318 | SUPERFAMILY | Ribosomal protein L10-like | 8 | 134 | IPR043141 | - | |
Spst1g02130 | 318 | Gene3D | - | 6 | 209 | IPR043141 | - | |
Spst1g02130 | 318 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN P0 | 5 | 303 | - | - | |
Spst1g02130 | 318 | MobiDBLite | consensus disorder prediction | 284 | 318 | - | - | |
Spst1g02130 | 318 | Pfam | Ribosomal protein L10 | 8 | 108 | IPR001790 | - | |
Spst1g02130 | 318 | PIRSF | L10E | 1 | 318 | IPR030670 | GO:0042254 | |
Spst1g02130 | 318 | Pfam | 60s Acidic ribosomal protein | 234 | 317 | - | - | |
Spst1g02130 | 318 | Pfam | Insertion domain in 60S ribosomal protein L10P | 114 | 183 | IPR040637 | - | |
Spst1g02130 | 318 | Gene3D | - | 114 | 185 | IPR043164 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g02130 | Spst-Chr1 | 29442662 | 29444991 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g02130 | 1 | 317 | Cytoplasmic Ribosomal Protein Gene Family | AT2G40010 | 78.549 | 0.0 | 502 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g02130 | K02941 | - | qsa:O6P43_008964 | 530.406 |