Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02120 ATGGAAAGACGAAAAGGCCCTTGCCACCGTGCGTCTGCTTCTGCATCATCTGCATTCTGCAGAAAGTACTTTTTGTGTTGTGCAGAACTTGTTTTGCCGCGGACTTATCTCCTTGGACCCCTTCGGTCCCACGGCCATGAAGAGCATGACCAAATCAGAGCAAGGAGTGATCCAGGGGCACCACTGGAATGGACGGATTACAAGTCAATGGCCTTTACTCAATGTGTTAGTATACAGTATACATATGTTGTGAACGAGACCTTGAGGGTGGCTAACATAATTGGTGGAATATTTAGGAGAGCAACGACAGACATCGACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTCCATCTGAATCCTGAACATTACAAAGATGCACGCACTTTCAATCCCTGGAGATGGCAGAGTAATTCATCAGAAGCAGCAAACCCTGGGAATGTTTATACACCTTTTGGAGGAGGGCCACGGTTGTGCCCTGGCTATGAGCTAGCCAGAGTTGTACTTTCTGTCTTCCTTCATCGCTTTGTCACCCGCTTCAGTTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTTCCAACAACTAGGACGCAGAAGAGGTATCCCATTGTTGTCAGCCGTAGAGACTAG 657 0.4688 MERRKGPCHRASASASSAFCRKYFLCCAELVLPRTYLLGPLRSHGHEEHDQIRARSDPGAPLEWTDYKSMAFTQCVSIQYTYVVNETLRVANIIGGIFRRATTDIDIKGYTIPKGWKVFASFRAVHLNPEHYKDARTFNPWRWQSNSSEAANPGNVYTPFGGGPRLCPGYELARVVLSVFLHRFVTRFSWVPAEEDKLVFFPTTRTQKRYPIVVSRRD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02120 218 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 160 169 IPR017972 GO:0005506|GO:0016705
Spst1g02120 218 Gene3D Cytochrome P450 41 216 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02120 218 PRINTS B-class P450 signature 158 167 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02120 218 PRINTS B-class P450 signature 99 126 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02120 218 PRINTS B-class P450 signature 82 93 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02120 218 PRINTS B-class P450 signature 167 178 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02120 218 PANTHER CYTOCHROME P450 26 35 191 - -
Spst1g02120 218 SUPERFAMILY Cytochrome P450 47 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g02120 218 Pfam Cytochrome P450 46 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02120 Spst-Chr1 29353535 29354918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02120 47 218 Cytochrome P450 AT5G05690 76.744 3.26e-96 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02120 K09588 - gmx:100789842 330.102