Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02116 ATGGCGCCTATTACCATCAATGCTATATACAAGCCAAGAAAGTTATACAAGCAAAATAAACTAAAGACCATTCAAAACATAAAGGCCGAAGCAGAGATGCGAATATTAGCTTGTGTCCACAACCCTCGGCAAGCCACAGGAATGATCAACATCCTTGAAGCATGCCACACCACAAAATTCTCCCCTCTACGCGTGTTTGCACTTCACCTTGTTGAACTAAGTGGAAACACCACTTCCCTTTTGGCTACCTATATCAATCAGCAAAGCCAACAGCAAAGTGGTGGTGCACTAGCCCCCACCAAAACGCAGCTAGACTTGGAGAGCATCACTAAAATTTTCCAAACATACACAGGTGTAATTGAGGACAATAACGTGGAGACCATTTCAGCTGCATCCACCTATTCAACCATTCATGAGGACATATACAACGTGTCACATGACAAACAAGCAAACCTGATTCTCCTTCCTTTCCACAAACAATCAAACATAGAAGGCATTCTAGAGATAGCCAACCCTGCATTCCAACAGATAAACCGCAATGTGATGAGAGATGCACCATGTTCTGTGGGAATCTTTGTTGACCGTGGACTTGGGTCATTGTTCAAAGTGAACTTACGTGTGGTTATGGTTTTTATTAGTGGTCCTGATGACCGTGAAGCATTGGCTGTTGCATGGAGGATGTCAAAGCATGAAGGGGTGCAACTATCTGTGGTGAGGATCCTCATGTTTGGTGAGGCTAGAGAAGTTGATGTTTTGTCCCGTGTCGAGTCTCGTGGACTATTATCTGCGGTAGTAGACAATGAGAAGCAAAAGGAGTTGGATGATGAGTATGTGAGTGCGTTCAGAATAAAAGCAGTGAGCAACGAGGATTCTATAAAGTATTCAGAGAAAGAAGTTCGTTGTCGTGATGATATTCCTGAAGTGCTTAATGAGATTGATCAATTTGGTTATGATTTGTATCTTATAGGACAAGGGGCAGGTAGGAGCTGTTTGATATTCTCAGAGTTGATGAAATGGACCGATTGTCCGGAACTTGGTGTCATAGGGGACATAGTGGCCTCAAATAATTTTGGTTCAAGCTCTTCACTGCTTGTTGTACAGCAATATGGGTTTGGGGGAATGGTGTTTGAGGACAGTAATACCACAGAGCATCCTGGGGAAGTAGTGCCTTCAAATAATGAAGATGACTCTGGGGCACTTGCTGTGAAGGTAGAATAG 1218 0.4327 MAPITINAIYKPRKLYKQNKLKTIQNIKAEAEMRILACVHNPRQATGMINILEACHTTKFSPLRVFALHLVELSGNTTSLLATYINQQSQQQSGGALAPTKTQLDLESITKIFQTYTGVIEDNNVETISAASTYSTIHEDIYNVSHDKQANLILLPFHKQSNIEGILEIANPAFQQINRNVMRDAPCSVGIFVDRGLGSLFKVNLRVVMVFISGPDDREALAVAWRMSKHEGVQLSVVRILMFGEAREVDVLSRVESRGLLSAVVDNEKQKELDDEYVSAFRIKAVSNEDSIKYSEKEVRCRDDIPEVLNEIDQFGYDLYLIGQGAGRSCLIFSELMKWTDCPELGVIGDIVASNNFGSSSSLLVVQQYGFGGMVFEDSNTTEHPGEVVPSNNEDDSGALAVKVE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02116 405 PANTHER CATION/H + ANTIPORTER 3 369 - -
Spst1g02116 405 MobiDBLite consensus disorder prediction 382 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02116 Spst-Chr1 29322055 29323272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02116 1 369 Antiporter Super Family AT2G13620 39.037 3.89e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02116 - - vun:114191181 644.425