Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02115 ATGGCTGAACAAGAAAATGCAGATCAATACTTAAAACGACGCGTAACTACAGGATGTTACAACGTAGATGTGTCAAATCCCAATGACATATGGAGAAGTGAAACTGTCCTGCTTTTTTACCTTCCTACCTTTGCAGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTGTTTTGTACTATCTCCTCAAACCTTTAAACCAACCTCGTCTTGTTTCTGAGATTTTGATGGGTATTCTGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGAGGTTCTCACCCCTTTGAAGTCAATCCTAACAACTGAAACCATATCATACGTGGGACTCATTTACAGTGTGTTCCTGGCTGGCTTGGACATGAATTTTGATACAATCCTAGGAGCAAGAAAGAAGGCCACAAGAATTTCCATTGCCGGCGTTTTGATTCCAATGGTATTTGGAGGTTTAATATATGCTCTGGCTCTAAATATGTTCAAGGGACCTTCCGATTATTGGGCAAATTTCAACACGCCTAAGGCTTTTATGTTTTGGGCCTTAATTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATCCTTGCAGATCTCAAGCTCCTCTATACAGGCCTTGGCAGAGTGGCCTTAACAACAGCCATGATCAGTGACTTCTATAATTGGGTCATGTTTGCACTGTTGGTTCCATTTGCCATAAATGGTGCAAGTGCCATCTACTCGGTGCTGAGCACCATAGTTTATGTGCTTTTCTGCTTCGTTGTTATACGTCCTTATTTGGTGGAGATAATAGTGCACAAAACCACTCAAAATGAGTGGGACAATAACGGATTGTTCTTTGTGGTCATGGGAGCATATGCTTCTGCACTGGTCACGGATCTCCTAGGGACACACCCTGTTGTTGGGGCTCTGGTGTATGGAATAATGATACCTCGTGGTAAATTTACTCACTTGCTCATTGAGAAGTCAGAGGATTTTGGAGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGACTCAGAGCAATATATGTCATAAAAACTCAAGGTTTGGGCCTGGTGCTGTTCATTTTGTTCCTATCATTCGTCCCAAAGATTTTAAGCACTGTAATAGCCACTCAGTTTTATGGTATGTCTGTTCTTGATGGTGTGTCTATTGGACTTCTCATGAACACCAAGGGTATCTTACCAATATTAATGCTCAACAATGCCTGGGACAAGCAGGTATCGAGTAATTTCATTACACTAGTCGTTTGCTTTCATGAATGGACATAG 1281 0.4145 MAEQENADQYLKRRVTTGCYNVDVSNPNDIWRSETVLLFYLPTFAAQVAFMLLSTRVLYYLLKPLNQPRLVSEILMGILISPELFGSSALSEVLTPLKSILTTETISYVGLIYSVFLAGLDMNFDTILGARKKATRISIAGVLIPMVFGGLIYALALNMFKGPSDYWANFNTPKAFMFWALILSVTGFPMVSHILADLKLLYTGLGRVALTTAMISDFYNWVMFALLVPFAINGASAIYSVLSTIVYVLFCFVVIRPYLVEIIVHKTTQNEWDNNGLFFVVMGAYASALVTDLLGTHPVVGALVYGIMIPRGKFTHLLIEKSEDFGVVYLAPLFFGSCGIRLRAIYVIKTQGLGLVLFILFLSFVPKILSTVIATQFYGMSVLDGVSIGLLMNTKGILPILMLNNAWDKQVSSNFITLVVCFHEWT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02115 426 Pfam Sodium/hydrogen exchanger family 50 409 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst1g02115 426 Gene3D - 43 422 IPR038770 -
Spst1g02115 426 PANTHER CATION/H + ANTIPORTER 30 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02115 Spst-Chr1 29320163 29321815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02115 19 420 Antiporter Super Family AT2G13620 33.496 2.91e-63 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02115 - - vun:114191181 708.368