Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02113 ATGGCGACCAAATTTTCAAAATCACAAAATTTCCAAGGAAAACTAACCCTAGTTTTCTTCCCCAAAATCAAACACCTTCCCTTTTTCATTTTCATCTTAATCACTTCGCTACTTCCTTCTTTCATTTTGATTTCGCTACGTCGATCTCCAATTTCTTACCCCACTCACTCTCTGAATAACCCTAACCCGCACTCCCCAATAACTCTATTCGCTGTTCACTCTGTTAGTCCCTTTCGGCGGCACGATTTACTCCGGCATAGCTCAGTTTACTCATTCGATGAGTTAAAAAGAAAGTACAGAAGCAGCAGGCAAAAGGATAGGATGGCTAAGTACTATGATATTGATGATATTATTATGGAGGAAGAGACTGTGTCAGTTATATTTCAGAAGGCTGCATCTGGAGTGGGAATAGATCCCAGTTCTGAAATGGACTTTATTGAAACAGGTTCAAAAGTTGAACTGCCTTTTTGGCTAGCTCACGAGTTACAGCTGAGACAGGCAGTATCAGTCAATGTTCCCTCTTGTTTTGATCAAAAAACAAGGCTAGAGATCCAAGCTGATTCGGCAGGTGTGGATCTGCGGTCTAGATGTCCATTCTTTTATGATTTTGGTTGCAAGATAGCGCCTATAGTTGGCGACCGAACCATTGGCTTTCTATTGTTGTCTGCATTTAAGAGTAGGTACAAGGAAATTCTCACCAAGGCACATTCTGTAGCATTTGCTGCAGGTTCCAAATTTTGGACTATTCTGACAAAAGAAGAGATCAACTTGTATGAAACAGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGGGGGCCCAGATTTCAGATAGCTGCTGTTCTGGGAAGAAAGAGAAAATCCACTGAATAG 879 0.4175 MATKFSKSQNFQGKLTLVFFPKIKHLPFFIFILITSLLPSFILISLRRSPISYPTHSLNNPNPHSPITLFAVHSVSPFRRHDLLRHSSVYSFDELKRKYRSSRQKDRMAKYYDIDDIIMEEETVSVIFQKAASGVGIDPSSEMDFIETGSKVELPFWLAHELQLRQAVSVNVPSCFDQKTRLEIQADSAGVDLRSRCPFFYDFGCKIAPIVGDRTIGFLLLSAFKSRYKEILTKAHSVAFAAGSKFWTILTKEEINLYETAQSAMASFKKWRMGGPRFQIAAVLGRKRKSTE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02113 292 CDD GINS_A_psf3 168 274 - -
Spst1g02113 292 SUPERFAMILY GINS helical bundle-like 172 273 IPR036224 -
Spst1g02113 292 Gene3D - 98 274 IPR038437 -
Spst1g02113 292 Pfam GINS complex protein 152 255 IPR021151 -
Spst1g02113 292 CDD GINS_B_Psf3 111 173 - -
Spst1g02113 292 PANTHER UNCHARACTERIZED 108 291 IPR010492 -
Spst1g02113 292 SUPERFAMILY PriA/YqbF domain 103 173 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02113 108 291 Core DNA Replication Machinery Family AT3G55490 67.391 2.25e-93 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02113 K10734 - gmx:100799874 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02113 1 29304562 29308161 Spst1g02113 1 29304562 29308161 ECH