Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02098 ATGAAAACAATATCGTCCTCCTCCGTCACCCTCTGTCTCGCCGTTGCCGCGCTGCTTATACTCTATCTTCCACGCTCTTCCCATGGCCTCGGCTCCGGTGCCACCCTTGCCATCTCCGACGCCTCCGCCACCGTATGCGCCATCGTGGCAGGCGAGTCCACGCGCCGCATTGAGTGTTACCGTCAGGGGCAGAATGTCTCCATCACTCCCAACGTTAGTTTTTCAACGATTTCCGGTGGGAGGGACTACTTCTGTGGTCTAAGGTCAAGTAACTCCGATTTATATTGCTGGAACACAAACTCTTCGTTCGAAAGGAGAAGGCTTTACAACGATAGTTCTGTTCCATTGGAGAATCTCGCCGTTGGGGATACCCACGTTTGCGCCACCGTGGTGGGTGGTGGCACGGTGATATGCTGGAGAACCGATGACACGTTTCGGCTTCCTTCTGAGACTGATCAATTCGCTTCAATTTCATCTGGGTCTGGCTTCTCTTGCGGAATTTTGAAGAATGATTCTCGGGTTCGGTGCTGGGGGAGCACCAACGTTTCGGTTTTATTGGAACAGATAGAAAATACATTTGGGAACATGTCCATGTTGAGTCTCGTCGCAGGTGGTTCACATGTTTGTGGATTGAACTCAACTGGATTTTTGGTATGTGGAGGGAGTAACGATTCTGGACAACTTGATTTTCCTCAAGGTGGGGCTTTTGAGTATTCTGGGTTGGCACTTGGAGCTGAACATGGTTGTGCTATAAGAGGACTGAATGGTTCGGTTGTGTGTTGGGGTGGCAATGGGGGATTCTCGGTGAATAATGTTACTCAAGGAGTTTCCTTTGAGGTAATTGTTTCTGGGTCTAATTTTGTTTGTGGATTGACAACAAACAATTTGACAGTGGTGTGTTGGGGTCCTGGTTGGTCTAATAGTTCGACGATTGAGCTTCCTTTTCCAAATGTTCTTCCAGGGTCTTGTGTTCAATCTTCTTGTGGAGAGTGTGGTTCATATCTTGATTCTCAATCTCTATGCTCTGGCTCCGGTAACATCTGTAAGCCGATGACTTGTAAGCCTCAAACAACAGCTCCACCGCCGCCATCACTGTCGCCGCCATCACTGTCGCCGCCATCACTGTCACCGCCTCCACCATCAATGTCATCGCCGCCGCCGCCGCCATCTCCGCCACCACCGTCGTCATCACGATCAAAGACCTTGACAAATGGGTTATTGGCATTTGCTATTATTGGTTCAGTGGGAGCTTTTGCTGGAATATGCACTATAGTTTATTGCTTGTGGAGTGGAGTTTGTTTTGGGAAGAAGAAAGTCCACAATTCTGTGCAGCCTACAATCACAAGAGGTAGCAGTGGTTCCAATGGTGGGGGTGCTTCTAATAATAGCAATTCGTCGATATCATCTATGATCATGCGACAGACTTCAATAATAATGAGGCGCCAGAGGAGTGGAACCTCATCAGCAAAGCACCCAGAAAGGGCTGAGGAGTTCACCCTGGCTGAGCTTGTGGCAGCCACCAACAACTTCTCACTTGAAAACAAGATTGGGGCCGGAAGCTTTGGTATTGTCTACAAAGGCAAACTAGCGGATGGACGCGAGGTGGCAATCAAGAGGGGTGAAACTGGTTCCAAGATGAAGAAGTTTCAAGAGAAGGAGAGTGCATTTGAATCTGAATTGGCCTTCTTGTCTCGGCTACACCACAAGCACTTGGTTGGACTAGTTGGGTATTGCGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGGGCGTTGTATGATCATTTGCATGACAAGAACAATGTGGAGAAGGGTAGCAGTGTGTTGAACTATTGGAAAATGAGGATCAAAATTGCTTTGGATGCTGCGCGGGGAATAGAATATCTTCATAATTATGCAGTTCCATCAATTATTCACAGAGACATAAAGTCTTCTAATATTCTTATTGATGCTACTTGGACTGCAAGAGTATCAGATTTTGGATTGTCCTTGATGAGTCCAGAACCTGACCGTGATTACCGTCCAATGAAGGCAGCAGGAACCGTTGGATACATTGATCCTGAGTACTATGGTTTAAATGTATTGACGGCAAAGAGTGATGTTTATGGGCTTGGAGTTGTACTGCTCGAACTTTTAACGGGAAAGAGAGCTATATTCAAGTATGGCGAAGATGGGGGCACCCCACTAAGTGTGGTGGACTTTGCAGTGCCTCCTATTTTGGCTGGAGAATTGGTGAAAATTTTGGATCCAAGGGTTGGACCACCTGATGTGAATGAGGCAGAAGCATTGGAATTGGTGGCCTATACAGCTATCCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGCGGTCAATTTGGAGAGGGCTTTGGCTATTTGTGAGAGTAGCCATGATAGCATTTCCAGTGGCACTATCTCTGTTGTTTCTGAATGA 2460 0.4715 MKTISSSSVTLCLAVAALLILYLPRSSHGLGSGATLAISDASATVCAIVAGESTRRIECYRQGQNVSITPNVSFSTISGGRDYFCGLRSSNSDLYCWNTNSSFERRRLYNDSSVPLENLAVGDTHVCATVVGGGTVICWRTDDTFRLPSETDQFASISSGSGFSCGILKNDSRVRCWGSTNVSVLLEQIENTFGNMSMLSLVAGGSHVCGLNSTGFLVCGGSNDSGQLDFPQGGAFEYSGLALGAEHGCAIRGLNGSVVCWGGNGGFSVNNVTQGVSFEVIVSGSNFVCGLTTNNLTVVCWGPGWSNSSTIELPFPNVLPGSCVQSSCGECGSYLDSQSLCSGSGNICKPMTCKPQTTAPPPPSLSPPSLSPPSLSPPPPSMSSPPPPPSPPPPSSSRSKTLTNGLLAFAIIGSVGAFAGICTIVYCLWSGVCFGKKKVHNSVQPTITRGSSGSNGGGASNNSNSSISSMIMRQTSIIMRRQRSGTSSAKHPERAEEFTLAELVAATNNFSLENKIGAGSFGIVYKGKLADGREVAIKRGETGSKMKKFQEKESAFESELAFLSRLHHKHLVGLVGYCEEKDERLLVYEYMKNGALYDHLHDKNNVEKGSSVLNYWKMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPEPDRDYRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKYGEDGGTPLSVVDFAVPPILAGELVKILDPRVGPPDVNEAEALELVAYTAIHCVNLEGKDRPTMADIAVNLERALAICESSHDSISSGTISVVSE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02098 819 MobiDBLite consensus disorder prediction 358 396 - -
Spst1g02098 819 Gene3D Phosphorylase Kinase; domain 1 470 590 - -
Spst1g02098 819 ProSiteProfiles Protein kinase domain profile. 510 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02098 819 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Spst1g02098 819 Gene3D - 189 312 IPR009091 -
Spst1g02098 819 MobiDBLite consensus disorder prediction 446 466 - -
Spst1g02098 819 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 194 805 IPR044815 GO:0004674
Spst1g02098 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Spst1g02098 819 SMART serkin_6 510 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02098 819 FunFam serine/threonine-protein kinase-like protein CCR1 479 590 - -
Spst1g02098 819 SUPERFAMILY RCC1/BLIP-II 65 267 IPR009091 -
Spst1g02098 819 Pfam Protein kinase domain 511 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02098 819 MobiDBLite consensus disorder prediction 358 400 - -
Spst1g02098 819 Gene3D - 27 188 IPR009091 -
Spst1g02098 819 SUPERFAMILY Protein kinase-like (PK-like) 490 795 IPR011009 -
Spst1g02098 819 Gene3D Transferase(Phosphotransferase) domain 1 591 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02098 Spst-Chr1 29200114 29202573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02098 1 819 Receptor kinase-like Gene Family AT3G55950 58.551 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst1g02098 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02098 - - vra:106757659 1394.79