Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02081 ATGAGCAAAAACTGGAAGTCCATCTGCTTCAGGGATCCTCTGTTCCTTCTAGCGTTGTCTTTGTTGTTTCAGAACTTTAGTTTATGTTGCTCTTTGAACGAAGAAGGTAAAGCTCTTCTGAAGTTCAAGCAAGGAATAGTAAGAGACCCTTTTGGTGCTTTGTCAAATTGGGTTAACGATGAAGTAGCAGTTACCCATTGTAATTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTAGTGGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGATAGCAAACCTTGTTCACATAAAGTCCTTAATTTTGCGAAATAATTCTTTTTATGGAATCATTCCTGAAGGAATTGCACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCTTTACCTACGGATCTTGGAAATAATATTTCACTAACAATCCTTTTGCTGGACAGCAATGACAATCTCTGTGGTATCTCTCCTGAAATTCATGAATTGAAGATGCTTTCTGAGTATCAAGTAGATCAAAGGCAACTAAATATGGGAGAAAAAGTGCCAGCTTGTACAAGAAGATTCATCAGGCGGCATATTGGCAAAAGTAAAAAGGTTCCTCGGAGGCTGTTGCAAATCCAATTTCGTCGTGGAAGTCCTTTTAACCGTGCTGATCCTCTTCCTGATAGTCCCGCTTCATCTCCCTCAGCTCCCTCACCTGCCCCAGCAACACCACCACCGGTTGAGAACCCAGCTTCCTTTGACCCAAACGATTCTAATTCTACTTCTGCTTCTCCTTCTCCCCTGCCTGAATCACGCTCTGCACCACCAGCTGAGAGTAGCTCATCAAAAAATAATCTTGTTGGTATTTTGGCTGGAGTTACATGTGGTGCTGTATTTCTTGTCATTTCAATCATTGGGATATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTCGTAACAGGTGTGCCAAAGCTGAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTCAGTAATGTAATTGGTACTTCATCCATTGGTACAGTGTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCCGTGGCCTCCGTTGCAGTGACATCATCCAAAGATTGGTCAAAGACTTTAGAGGCCCAGTTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAGTACGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGGATTGGGAAACAAGACTTAGAGTTGCTATGGGCATGGCTTACTGCCTACAACATATGCACCAGTTGCAGCCTCCTTTGGTCCTTCGCAGCCTGAATTCTTCAGATGTACAACTTACTGATGATTGTGCTGCCAAAGTCTCTGATTTGAGTTTCTTAAATGAAATAGCTTCAGCTGCGATAAAGTCTCCAGCTAGAAAACACCCTGACATGACACCAGCAAGTAACATTTACAGTTTTGGTGTTTTATTATTTGAAATGGTAACAGGCAGGCTCCCTTATTCAGTGGACAATGAGGGCTCACTTGATGACTGGGCTTCACAATATTTACATGGGGATCGGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCATCCTTCCAAGAAGAACAGCTGGAACAGGTTGATGCTTTGATCAAATCTTGTGTCCATCCTGATCAAAAGCAAAGACCAACTATGAAAGAAGTTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCTGAAGCAGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCCGTAAATGGAAACTGA 1935 0.4176 MSKNWKSICFRDPLFLLALSLLFQNFSLCCSLNEEGKALLKFKQGIVRDPFGALSNWVNDEVAVTHCNWFGVECSDGRVVVLNLKDLCLEGNLVPEIANLVHIKSLILRNNSFYGIIPEGIAHLNELEVLDLGYNNFSGPLPTDLGNNISLTILLLDSNDNLCGISPEIHELKMLSEYQVDQRQLNMGEKVPACTRRFIRRHIGKSKKVPRRLLQIQFRRGSPFNRADPLPDSPASSPSAPSPAPATPPPVENPASFDPNDSNSTSASPSPLPESRSAPPAESSSSKNNLVGILAGVTCGAVFLVISIIGIYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAVTSSKDWSKTLEAQFRKKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWETRLRVAMGMAYCLQHMHQLQPPLVLRSLNSSDVQLTDDCAAKVSDLSFLNEIASAAIKSPARKHPDMTPASNIYSFGVLLFEMVTGRLPYSVDNEGSLDDWASQYLHGDRPLKEMVDPTLASFQEEQLEQVDALIKSCVHPDQKQRPTMKEVCVRLREITKITPEAAVPKLSPLWWAELEIASVNGN 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02081 644 MobiDBLite consensus disorder prediction 222 285 - -
Spst1g02081 644 MobiDBLite consensus disorder prediction 234 255 - -
Spst1g02081 644 FunFam Inactive receptor-like serine/threonine-protein kinase 328 436 - -
Spst1g02081 644 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Spst1g02081 644 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Spst1g02081 644 PANTHER PROTEIN MALE DISCOVERER 2 14 641 - -
Spst1g02081 644 Gene3D Transferase(Phosphotransferase) domain 1 437 625 - -
Spst1g02081 644 Pfam Protein tyrosine and serine/threonine kinase 356 612 IPR001245 GO:0004672|GO:0006468
Spst1g02081 644 Gene3D Ribonuclease Inhibitor 30 207 IPR032675 -
Spst1g02081 644 FunFam Nuclear pore complex protein NUP107 32 191 - -
Spst1g02081 644 MobiDBLite consensus disorder prediction 256 285 - -
Spst1g02081 644 ProSiteProfiles Protein kinase domain profile. 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g02081 644 SUPERFAMILY Protein kinase-like (PK-like) 337 613 IPR011009 -
Spst1g02081 644 SUPERFAMILY L domain-like 32 176 - -
Spst1g02081 644 Gene3D Phosphorylase Kinase; domain 1 326 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02081 Spst-Chr1 29043502 29047195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02081 31 615 Receptor kinase-like Gene Family AT5G16000 26.230 1.51e-49 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst1g02081 PK_Tyr_Ser-Thr 3.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02081 - - gmx:100784541 1028.85