Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g02075 | ATGGCTGGGAATTCTCCATGTGCTTCATGCAAGCTGCTGAGACGCAGGTGCACCAAGGACTGCATCTTTGCTCCTTATTTCCCTTCCAATGACCCTCAAAAGTTTGCCTTAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGCTGCAGGAACTTCCTGTTCAGCAGAGATCAGATGCTGTGAGTAGTTTGGTGTATGAAGCACATGCAAGAGTTCGGGACCCGGTGTATGGTTGTGTTGGGGCCATATCCTATCTGCAACACCAGGTTTCTGAGCTTCAAATGCAGCTTGCAGTGGCTCAAGCAGAGATATTCTGCATCCAGATGCAACAGGAACCAGTGATGCCAAATCCAGAAATGGAAAACCCAGATCAGAAATCTTACCTTCTCCAGAATGAACTCCCTCAGTACCTCAACTATGCCTCTTCTAGCAATGTAATTTATGATGCTGTCACAAGAGAGAGCATTTTTGGACATGACATGGTTTCCTGA | 498 | 0.4578 | MAGNSPCASCKLLRRRCTKDCIFAPYFPSNDPQKFALVHKVFGASNVSKMLQELPVQQRSDAVSSLVYEAHARVRDPVYGCVGAISYLQHQVSELQMQLAVAQAEIFCIQMQQEPVMPNPEMENPDQKSYLLQNELPQYLNYASSSNVIYDAVTRESIFGHDMVS | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g02075 | 165 | Coils | Coil | 85 | 105 | - | - | |
Spst1g02075 | 165 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 4 | 124 | - | - | |
Spst1g02075 | 165 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - | |
Spst1g02075 | 165 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g02075 | Spst-Chr1 | 28998197 | 28998960 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g02075 | 3 | 117 | AS2 family | AT2G30130 | 85.217 | 7.22e-71 | 210 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Spst1g02075 | LOB | 1.1e-42 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g02075 | - | - | gmx:121173085 | 304.293 |