Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02062 ATGAAGGACAGTTCCATAGCCGCTGTGTTTAATGACACTAGAACTGGTCGTTTGGTGGTTTGTCTCAAGAATGATAGAACTGCTGTAGGCTCCTTGGGCGTGTGGGTTGGGGATAATCCATTCGACTTTGTGATGCCTATCACGTTGTGCCAAGTCATATTACTCGTTTTACTCTCAAAAGGGTTGCATTATATCCTCAGGCCAATACATACTCCCAAGTTCATCTGCTCTATCATCGCTGGAGTTCTGCTGGGGCCAACATGCTTAGGGAACATTAACGAATTGATGCTGGGGGCTATGTTTCCGCAAAAACAATCTTTGGTTTTGAATACGTTGGCCAAAATAGGCACTATTTATTGTGTGTTTCTCACAACTCTGAAAATGGACGTAACGACAACATTAAAAGCAGCAAAAAGATGTTGGCAATTCGGCGTGTTTCCCTTCTTCGCTTCTTTCTTCGTCACAGCGACCTTGTTGTCTTCGTATTCGCCCAATGGCGCTGATATACACAGAAAACAATTGTCTTTATACAACTTCCCCAACGTCTTCACCCTAAGTAGTTTCGCTGTTATATCAGAAAGCCTGTTGGAACTCAACCTCATGGCCACGGAACTGGGCCAAATCGCTTTGTCTTCAGCCATGATCAGCGAGTTATTGCAATGGATTACGATGGAACTCCAGTTCAACACAAACTTGAGCATAGACTTTTTTCTTGTCTTCTTGACGGGTGCATGCGGATTCGGTGTGTTGTGTCTTCTTATTGTGAAGCCACTGGTGAACATTGTTGTTGAGAGAACACTACCGGGGAAACCAATGAAAGAAGCATACGCTGTGTTGATACTTCTGGGGCCACTTGTTATGGCAGCTATTAGCGACAGCTTTGGGATATTCTTCGTTATGGGACCTCTCCTCTATGGTTTTGTTCTTCCCAATGGACCCCCCGTGGCTACAACAATTATAGAGAGGAGTGAATTGATAGTCTCTGAGTTTTTTATGCCTTTCTTCTTCTTATTTGTTGGCAAAAGAACAAAGTTGACTGGAATTCATGGCCATTGGAAGGTGGCTCTCACAGTTCAGGCTATCTTATTTCTGGGATGCGTGGTCAAGGTGATCGCATGTGCCATTATTTCTCCCACGTATAAAATTAAGCCCAAACATGGCGTCGTGCTTGGCCTCATTTTGAACGTCAAGGGTATAGTGGAACTCATTTTTTACAGTAGAATGAACAAACTCGGGGTAATTGATACAGAAGTATACTCTGTAGCGGTGATGTATGTGGTGATGATCACATCACTTTGCATACCCTTGATCAAAACCCTGTACAGGCACCGTCGCGTGTGCATAACGCCGAGCATACAAGAAGGGCGTGTGAGAACAATTCAAAACTTCAACGGAAACACAGAATTCAACATCGTTCCGTGCGTGCACACGGATCAGCATGTGCGCAGCATGATTGCCCTAATAGAGGCATGCAACCCAACCACGGAAAGCCCCATCAAGGTCTACGCGGTCCATCTCATTGAGCTCTTCGGCAAAAGCACACCCTTTCTTCTTCCCATGACCAGGAGCAACAGAAAAACTTTTTCCGTCAACTACCCAAACACCACCCACATCTTGCGTGCCTATGAGAACTACACCAACAACTCAAGTGGTCCTGTAAATGTTCGTCCATACATCAACGTTGCCCCATACAGAAACATGCACGAAGCAGTTTGTAACCTCGCGGAAGATAACTCTGTGCATCTCCTCCTTATTCCGTTTCACCTAAATGATCAGAGTCTTGCAAGCCACGTGGCCATCAGCATGCGCGAGCTCAACGCAAATTTTGTTGCTAACTCATGGGGCACGTTGGGGATTCTTGTGGATAGATTCTCCGTGCTGAGTGGGAGTAGCTCCAACTTGTCTTTTCATGTGGGTGTCTTCTTCATCGGCGGAAAAGACGATAGAGAAGCATTGGCGTTGGGAATTCGAATGTTGGAACGCGCCAACACGCGAGTGACCTTGTTCCGGTTTGTTTTTCCAACCAAAGGAGATTCCAGGTTTGGGATATATGGATTTGTGGGAAATGAAGAGGATACGTTAGAGAGAACGTTGGACGAGAGTTTAATAGATGAGTTTACTGCCAAGAATGATTATAGCAGTGATGTGATTAAAGTTGTTTACCATCCGGTTGTGGTTGAAGATTGCATACAAGTGTTGGAAGCTATTCGGGGAATGGAGAGCGACTATGACCTTGTGATGGTGGGGAAGCGACATAGCATGGGGGATTTTAGGGAAGAAGAAATGTCAACTTTCATGGACAATTCGGATCAGTTGGGAATTGTGGGGGATATGTTGGCATCCAGTGAGTTTTGTCATGGAAAAGCTCCTGTCTTGGTGATGCAATGTGGTGAGAGGAGGGTAAAACAACTAGAAAAGCTACGCCATGGTCACGTCTCCCTTTAA 2445 0.4524 MKDSSIAAVFNDTRTGRLVVCLKNDRTAVGSLGVWVGDNPFDFVMPITLCQVILLVLLSKGLHYILRPIHTPKFICSIIAGVLLGPTCLGNINELMLGAMFPQKQSLVLNTLAKIGTIYCVFLTTLKMDVTTTLKAAKRCWQFGVFPFFASFFVTATLLSSYSPNGADIHRKQLSLYNFPNVFTLSSFAVISESLLELNLMATELGQIALSSAMISELLQWITMELQFNTNLSIDFFLVFLTGACGFGVLCLLIVKPLVNIVVERTLPGKPMKEAYAVLILLGPLVMAAISDSFGIFFVMGPLLYGFVLPNGPPVATTIIERSELIVSEFFMPFFFLFVGKRTKLTGIHGHWKVALTVQAILFLGCVVKVIACAIISPTYKIKPKHGVVLGLILNVKGIVELIFYSRMNKLGVIDTEVYSVAVMYVVMITSLCIPLIKTLYRHRRVCITPSIQEGRVRTIQNFNGNTEFNIVPCVHTDQHVRSMIALIEACNPTTESPIKVYAVHLIELFGKSTPFLLPMTRSNRKTFSVNYPNTTHILRAYENYTNNSSGPVNVRPYINVAPYRNMHEAVCNLAEDNSVHLLLIPFHLNDQSLASHVAISMRELNANFVANSWGTLGILVDRFSVLSGSSSNLSFHVGVFFIGGKDDREALALGIRMLERANTRVTLFRFVFPTKGDSRFGIYGFVGNEEDTLERTLDESLIDEFTAKNDYSSDVIKVVYHPVVVEDCIQVLEAIRGMESDYDLVMVGKRHSMGDFREEEMSTFMDNSDQLGIVGDMLASSEFCHGKAPVLVMQCGERRVKQLEKLRHGHVSL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02062 814 PANTHER CATION/H + ANTIPORTER 31 795 - -
Spst1g02062 814 Gene3D - 47 447 IPR038770 -
Spst1g02062 814 Pfam Sodium/hydrogen exchanger family 52 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02062 Spst-Chr1 28870927 28873835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02062 33 795 Antiporter Super Family AT2G13620 32.614 6.44e-124 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02062 - - pvu:PHAVU_001G246600g 1216.83