Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g02059 | ATGCTCATCATGAATAGTTACAACTTACAAGGAAAACTAGCCGTTACTCACTGTTTCTCACAAACAAAGACAACCTTCGAACTCTGCATTCCTTCTCTCTCTATTATACTCTCAACCCCGCGCGCACCTACACTTCTTTATGTCATCACGTGCTCCTTCTCATTCTTCCTCTCTACAAAAACCATCCTTCAACTGTTCCTATCTATCTCCCCTTCACTTCCAACACACTCTCTTTTTGTTCCACTAATTCAAACATCTCTTTTCATTATGGTAGTAGAGAAAATCAACCTTAACTCTTGTCAGTTTTCACAACATGAAACAAGAAATGCAGACCATATTTCTGACAAGAAGAAGGAAAGATGGAAGAAGACCCCGCCCAAGGCACACAACATCCCATGTTGTTTTCTGTTTCTCTTCTGGGTGTGGATTCTTGTTCTCGCCACATGCTTGAAACCAGTTTTGTGTGAAGACGAGGGTTGGGATGGAGTGGTTGTGACAGCATCAAACTTCTTAGCACTTCAAGCGTTCAAGCAAGAGTTGGTTGATCCTGAAGGCTTCTTGCGGAGCTGGAATGATAGTGGTTTTGGAGCTTGTTCCGGAGGTTGGGCTGGTATCAAGTGTGCTAGGGGAGAGGTTATTGTAATCCAGCTTCCATGGAAGGGGTTGAGAGGGCGTATTACTGATAAGATTGGTCAGCTTCAAGGCCTGAGGAAGCTTAGTCTCCATGATAATCAAATTGGAGGTTCAATCCCTTCTACTCTGGGACTTCTTCCTAACCTAAGAGGGGTTCAATTATTCAACAATAGGCTAACAGGTTCCATCCCTCCTTCCTTAGGTTACTGTCCTTTGCTTCAGTCTCTTGACCTCAGCAACAACTTGCTCACAGGAGCAATCCCTTATAGTCTTGCCAATTCCACCAAGCTTTATTGGCTTAATTTGAGTTTTAACTCCTTCTCTGGTCCTTTACCAGCTAGCATAACTCACTCACTTTCCCTCACATTCCTTTCTCTTCAACATAACAATCTCTCTGGCTCCCTTCCTAACTCTTGGGGTGAGAGTCTCAAGCGTGAAGAGTTCTTTAGACTTCAAAATTTGATCCTAGATCATAACCTTTTTACTGGAAATGTTCCTTCTTCTTTGGGTAGCTTAAGAGAACTCAATGAGATTTCCCTTGGTCATAATAAGTTCAGTGGAGCTATACCAAATGAAATAGGAACTCTTTCTAGGCTTAAGACACTAGATATTTCTAATAATGCCTTGAATGGGAGCTTGCCTGCTACCTTCTCTAATTTATCCTCGCTTACGCTGCTAAATGCAGAGAACAACCTCCTTGAAAATCAAATCCCTGAAACTTTAGGGACTTTACGCAATCTTTCTGTTCTAATTTTGAGTAGAAACCAATTTCGTGGACATATTCCTTCTAGTATCGCAAACATTTCCACTATTAGGCAGCTTGATTTGTCAATGAATAATCTCAGTGGAGAAATTCCAGTTTCCTTTGACAGTCAACGTAGTCTTCATCTCTTCAATGTTTCTTACAATAGCCTCTCAGGTTCTGTTCCCCCTGTTCTTGCCCGGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGATACAGCCCTTCAACACCATGTCCTTCACAAGCTCCATCAGGAGTAATTGTTGCCCCACCTCATGAAATGTCAAAACACCACAATCATAGGAAGCTAAGTACCAAAGACATTATTCTCATAATAGCAGGAGTTCTTCTAATAGTCCTGATTACACTTTTTTGCATCCTTCTCTTCTGCCTGATCAGAAAGAGATCAACATCAAAGACAGAGAATGGCAGAGGTGCGGGGAGAGCTGGCACTATGAGGACAAAAAAAGGAGTCCCTCCTGTTGCTACTGGTGATGTTGAAGCAGGTGGGGAGGCTGGAGGGAAACTAGTCCATTTTGATGGACCAATTGCTTTTACAGCTGATGATCTCTTGTGCGCAACAGCTGAGATAATGGGAAAGAGCACCTATGGAACTGTTTATAAGGCGATATTGGAGGATGGAAGTCAAGTTGCAGTAAAGAGATTGAGAGAAAAGATCGCTAAAGGTCAGAGAGAATTTGAATCAGAAGTCAGTGTTCTAGGAAAAATTAGACACCCCAATGTTTTGGCTCTGAGGGCCTATTACTTGGGACCCAAAGGGGAGAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTGTTGCTTCTTTCCTACATGGTAAGTTTGGTTTTGCAAATAGGGGAAAACTTATACATAGTAGTGGAACAGAAACATCCATTGATTGGCCAACAAGGATGAAAATAGCACAGGACATGGCTCGTGGCTTGTTTTACCTCCATTCCCAGGAGAACATTATACATGGGAACCTCACATCCAGCAATGTGTTGCTTGATGAGAATACAAATGCAAAAATTGCAGATTTTGGTCTTTCTAGGCTGATGACAACTGCTGCTAATTCCAACGTGATAGCTACTGCTGGAGCATTGGGATACCGGGCACCTGAGCTCTCAAAGCTCAAGAAAGCCAACTCCAAAACTGATATCTATAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAGTCACCTGGGGTGTCTATGAATGGAGTAGATTTGCCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGCAGACTTAATGAGAGATGCTTCAACAGTTGGCGATGAGTTGCTAAATACATTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCATCAAGTGCTTCAGCAGTTAGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTCCAGGGGACGATTCTATAGCATAG | 2889 | 0.4247 | MLIMNSYNLQGKLAVTHCFSQTKTTFELCIPSLSIILSTPRAPTLLYVITCSFSFFLSTKTILQLFLSISPSLPTHSLFVPLIQTSLFIMVVEKINLNSCQFSQHETRNADHISDKKKERWKKTPPKAHNIPCCFLFLFWVWILVLATCLKPVLCEDEGWDGVVVTASNFLALQAFKQELVDPEGFLRSWNDSGFGACSGGWAGIKCARGEVIVIQLPWKGLRGRITDKIGQLQGLRKLSLHDNQIGGSIPSTLGLLPNLRGVQLFNNRLTGSIPPSLGYCPLLQSLDLSNNLLTGAIPYSLANSTKLYWLNLSFNSFSGPLPASITHSLSLTFLSLQHNNLSGSLPNSWGESLKREEFFRLQNLILDHNLFTGNVPSSLGSLRELNEISLGHNKFSGAIPNEIGTLSRLKTLDISNNALNGSLPATFSNLSSLTLLNAENNLLENQIPETLGTLRNLSVLILSRNQFRGHIPSSIANISTIRQLDLSMNNLSGEIPVSFDSQRSLHLFNVSYNSLSGSVPPVLARKFNSSSFVGNIQLCGYSPSTPCPSQAPSGVIVAPPHEMSKHHNHRKLSTKDIILIIAGVLLIVLITLFCILLFCLIRKRSTSKTENGRGAGRAGTMRTKKGVPPVATGDVEAGGEAGGKLVHFDGPIAFTADDLLCATAEIMGKSTYGTVYKAILEDGSQVAVKRLREKIAKGQREFESEVSVLGKIRHPNVLALRAYYLGPKGEKLLVFDYMPKGSVASFLHGKFGFANRGKLIHSSGTETSIDWPTRMKIAQDMARGLFYLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANSKTDIYSLGVILLELLTRKSPGVSMNGVDLPQWVASIVKEEWTNEVFDADLMRDASTVGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIRPERSVTASPGDDSIA | 962 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g02059 | 962 | ProSiteProfiles | Protein kinase domain profile. | 662 | 946 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g02059 | 962 | PRINTS | Leucine-rich repeat signature | 407 | 420 | - | - | |
Spst1g02059 | 962 | PRINTS | Leucine-rich repeat signature | 284 | 297 | - | - | |
Spst1g02059 | 962 | FunFam | Os07g0541700 protein | 757 | 838 | - | - | |
Spst1g02059 | 962 | Gene3D | Transferase(Phosphotransferase) domain 1 | 740 | 959 | - | - | |
Spst1g02059 | 962 | FunFam | Leucine-rich repeat receptor-like protein kinase | 647 | 738 | - | - | |
Spst1g02059 | 962 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 355 | 552 | - | - | |
Spst1g02059 | 962 | SUPERFAMILY | Protein kinase-like (PK-like) | 666 | 949 | IPR011009 | - | |
Spst1g02059 | 962 | Gene3D | Phosphorylase Kinase; domain 1 | 668 | 739 | - | - | |
Spst1g02059 | 962 | CDD | STKc_IRAK | 668 | 946 | - | - | |
Spst1g02059 | 962 | Pfam | Leucine rich repeat | 361 | 420 | IPR001611 | GO:0005515 | |
Spst1g02059 | 962 | Gene3D | Ribonuclease Inhibitor | 168 | 325 | IPR032675 | - | |
Spst1g02059 | 962 | Gene3D | Ribonuclease Inhibitor | 326 | 422 | IPR032675 | - | |
Spst1g02059 | 962 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 360 | 946 | - | - | |
Spst1g02059 | 962 | Gene3D | Ribonuclease Inhibitor | 423 | 550 | IPR032675 | - | |
Spst1g02059 | 962 | Pfam | Leucine rich repeat N-terminal domain | 171 | 207 | IPR013210 | - | |
Spst1g02059 | 962 | SMART | LRR_typ_2 | 257 | 281 | IPR003591 | - | |
Spst1g02059 | 962 | SMART | LRR_typ_2 | 407 | 430 | IPR003591 | - | |
Spst1g02059 | 962 | SMART | LRR_typ_2 | 455 | 478 | IPR003591 | - | |
Spst1g02059 | 962 | SMART | LRR_typ_2 | 233 | 256 | IPR003591 | - | |
Spst1g02059 | 962 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 166 | 354 | - | - | |
Spst1g02059 | 962 | MobiDBLite | consensus disorder prediction | 609 | 630 | - | - | |
Spst1g02059 | 962 | SUPERFAMILY | L domain-like | 206 | 542 | - | - | |
Spst1g02059 | 962 | Pfam | Protein tyrosine and serine/threonine kinase | 665 | 943 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g02059 | Spst-Chr1 | 28843542 | 28846673 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g02059 | 160 | 948 | Receptor kinase-like Gene Family | AT3G51740 | 62.735 | 0.0 | 937 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Spst1g02059 | PK_Tyr_Ser-Thr | 1e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g02059 | - | - | pvu:PHAVU_001G246800g | 1533.08 |