Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02052 ATGTTATTTTCTGAAATTAAGCTGCCTGAAACTCTTGATAAGTTGCCTGAAAGTAAATGTGGGTTTGATTCATATGGAGTCTTAAAAGCACGTACTGAATCTGGGTGTTGTTGCAATGAGTATGATAAGGTGCCTGATAATAAGTATGGGAGCAATAGATATTTGGGTGTATTCAATATTGTGAGTGTGACAAGTCTTCAAAGGAGTTCCAAAAATCACTACAACCCCACTTCTCTTTTGTTCTTTAATTTTACGCTTTCTCTTCCACTTCTCATCTCTCCCCACGGCTTAGACTCAGAGTTTTGCTTATTCCTCTTCTTCTGCTCTGTCATGGCAAATGTTGTGGAGGTGAAAGTTGGTTTGCACTGTGACGATTGTATCAAGAAAATCCTCAAAGCCATCAAGAAAATTGAAGATATTGAAACCTATAACGTGGACACGGCAATGAACAAGGTCATCGTTACTGGCAAGGTCACAACACAGCAAGTCATCAGAGTCCTTCAAAAGATTGGCAAGAATGCAATTGCCTGGGAAGATGTCTCTTTGATGACCATAGTCTCTCAGTTAATGGTCAGATGTCTTACGCCATTAGGACAATCCACTCTTGTATCCCAGATGCTTGGGGGACTGATGTTTGGGCCGTCAGTTTTGGGGCACAAAAAGATTCTGGGGCAAGCCTTATTTCCCGTGAGGGGTGCTGTAGTGCTTGAAACAATTTCATGGTTTGGCGTCATGTTTTCCTACTTCTTATGGAGTGTTAAAATGGATATTTCCACATTCTTCAAGACAGAAAAGCTAGCCATAGCTCTTGGATCATCTGTGTTTGTATGTACATTGGTTATCCCTACTGGAGTCGCCTACCTATTAGCGAAACATGTTGAAATGAAACAGAGTGTTGCAACTGCACTTCCGTTGATAGGTCTCTCACAATCCTTTACTGTATTCGTTACCATAGCAATTCTATTATCAGATCTCAAAGTCCTTAACACTGATATAGGACGAATAACCATGGGAGCATCAGTGCTTACTAATATGGCGAGCTTTGTTGTTATAATAATTATGTTTATAATTTCGCAGAATGTGGATGGTGACATGGTGAAACTCGTAATCGTTTGTCTATCTATAGTTTCACTCGTGGTTGTTATTGTATTTATGATAAGGCCAATGATACTTTGGATGGTAGAGCACTCCGGTAGAGGTTCGCTTAATGAAATTTGCGTTGTTCACATCTTTGTCTTCGTTCTCTTTACTGGATTTGTCAGTGAAGTAATTGGGCAACATTTTGCTATGGGACCAATAATTTTAGGCCTGTGTCTTCCAGAAGGACCACCAATAGGAACATCTTTGATGACAAAATTGGAGACAATTTGCATGGCTTTTCTTAATCCAATCTTCCTAGCTGTTAACGGATTACAAGCTGATATCTCCAAAATCGACTTTCATTCTATGTGGCTTATCTGTCTCGTTCTCATCGTGGCTTTCTTTGTAAAGATTGGTGCTGTCATGCTACCAGGATACTATTACAATCTACCCATGAAAGAATGTTGTGTCATTGGTCTCCTTCTAAACGGAAGGGGCACATGTGAGCTTGTCTTGTACAATTTGTGGTTGGGAAGCCGGCAAGTAACGGAGCGCGAGTTCTCTTTATTGGTGGTCACCATTATTGTAGAAAATATTTTCTCAGTACCACTTATAAAATTCATGTATGATCCTTCAAAACAATATCAGACAGGAAGGAGATGCACAATCCAACATACTAGGCGAGATTCGGAGCTTCGAGTCATGGTGTGCATTGACAGTTCTGAAAACCTCCCTACAATCCTGAACCTCTTAGAAGCATCCTGTGCTAGTAGAGAGAGCATGATTGAAGTGACATCATTAATCCTAATTGAGCTTCAAGGAAGACTCAGACCAGTTCTTGTTAATAACAAATCCAGTGATAATATACATCCACTCTCAGGCAACTCAATTCACATTGACAATGCCTTGAGGCAGTATGCGGAACAAAATGAAGGATATGTCTCCATTCAGTCTTTCACTTCAATCTCCACATTTGAAACGATGCATGATGATGTTTGTAGAATTTCACTAGAATGTGGAGCCAACATTTTGATCTTGCCGTTCCATAAGAGGTGGGAAATTGATGGCACCATTGGGGCCGAACATAAGTCCATCCAGAACATGAACATTAGAGTCCTGGAGAGGGCACCGTGTTCTGTGGGAATTCTAGTTGACAGAGGTATCCTGAATGATTCTCCTTCACTCTTGATGGCTAGAGGAATGTATTATGTTGTTGTATTCTTTATTGGTGGTGCAGATGACGCAGAGACATTAGCCTATGGCAATAGAATGGCTAGGCATGAGTGTGTGTATGTAACTGTGGTTCGGTTCCTTCTATTTGGTGAGGAAAATTCCAAGGATAGAAAACGGGACAGTGATCTTATAGATGAATATAGATACCACAATGCTGGAAATCGTAGGTTTGAGATTTTGGATGAAGTTGTGAAAGACGGGATAGAGATGTCTACATGCGTAAGAAGATTGGTAGATTATTTTGATCTTGTGATGGTGGGGAGGGAACATCCAGATAGTGTTATGTTGCGAGGACATGATAAATGGAGTGAATGTCACGAGCTAGGGGTCATTGGGGACATGCTAGCATCACCAGATTTCGTTACTAAGGCATCGGTGTTGGTGATACAACAGCAGAGAATAAGAGGAAGGTTTATTAAATCCACTGTAAATGTGAATGCAGTCCCAAGAGAGAGAGAACAACTAATGCATGAAGTTCCAATTGTTGAAACATTTCCTCCTTCGTGTACTATTTCAGTGGACAAATATGACAAAATGTAG 2853 0.4052 MLFSEIKLPETLDKLPESKCGFDSYGVLKARTESGCCCNEYDKVPDNKYGSNRYLGVFNIVSVTSLQRSSKNHYNPTSLLFFNFTLSLPLLISPHGLDSEFCLFLFFCSVMANVVEVKVGLHCDDCIKKILKAIKKIEDIETYNVDTAMNKVIVTGKVTTQQVIRVLQKIGKNAIAWEDVSLMTIVSQLMVRCLTPLGQSTLVSQMLGGLMFGPSVLGHKKILGQALFPVRGAVVLETISWFGVMFSYFLWSVKMDISTFFKTEKLAIALGSSVFVCTLVIPTGVAYLLAKHVEMKQSVATALPLIGLSQSFTVFVTIAILLSDLKVLNTDIGRITMGASVLTNMASFVVIIIMFIISQNVDGDMVKLVIVCLSIVSLVVVIVFMIRPMILWMVEHSGRGSLNEICVVHIFVFVLFTGFVSEVIGQHFAMGPIILGLCLPEGPPIGTSLMTKLETICMAFLNPIFLAVNGLQADISKIDFHSMWLICLVLIVAFFVKIGAVMLPGYYYNLPMKECCVIGLLLNGRGTCELVLYNLWLGSRQVTEREFSLLVVTIIVENIFSVPLIKFMYDPSKQYQTGRRCTIQHTRRDSELRVMVCIDSSENLPTILNLLEASCASRESMIEVTSLILIELQGRLRPVLVNNKSSDNIHPLSGNSIHIDNALRQYAEQNEGYVSIQSFTSISTFETMHDDVCRISLECGANILILPFHKRWEIDGTIGAEHKSIQNMNIRVLERAPCSVGILVDRGILNDSPSLLMARGMYYVVVFFIGGADDAETLAYGNRMARHECVYVTVVRFLLFGEENSKDRKRDSDLIDEYRYHNAGNRRFEILDEVVKDGIEMSTCVRRLVDYFDLVMVGREHPDSVMLRGHDKWSECHELGVIGDMLASPDFVTKASVLVIQQQRIRGRFIKSTVNVNAVPREREQLMHEVPIVETFPPSCTISVDKYDKM 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02052 950 PANTHER CATION/H + ANTIPORTER 179 904 - -
Spst1g02052 950 ProSiteProfiles Heavy-metal-associated domain profile. 112 175 IPR006121 GO:0046872
Spst1g02052 950 SUPERFAMILY HMA, heavy metal-associated domain 112 178 IPR036163 GO:0046872
Spst1g02052 950 Pfam Heavy-metal-associated domain 117 172 IPR006121 GO:0046872
Spst1g02052 950 Gene3D - 177 578 IPR038770 -
Spst1g02052 950 Gene3D - 112 176 - -
Spst1g02052 950 Pfam Sodium/hydrogen exchanger family 185 560 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02052 Spst-Chr1 28793539 28799666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02052 194 902 Antiporter Super Family AT2G13620 34.464 2.45e-137 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02052 K26731 - gmx:100779700 1107.43