Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02046 ATGGAGGCTGCCGTAGTTAAATCCACCTGTACGACGCACCTTATCAAGAAGGAAAGGGAAGGTGGAATTTTTTTGACAAAACAAAACCATTCATTCTCCGATCCCCACAGTTTCACCGCCGCCATGTCTCCGTCTGTCGGAGTCAACGTCCCCCTGCTGGGGGAATCCAACGGAACGCCTCCGCCGGCGTCCGTTCCCGGCGCGGTGTTCAACGTGGCGACGAGCATAGTCGGTGCCGGAATCATGTCAATTCCGGCGATCATGAAGGTTCTCGGAGTGGTTCCTGCTGTCGCCATGATTCTCGTCGTGGCCGTGCTCGCGGAACTCTCCGTCGAGTTCCTCATGCGCTTCACGCACACCGGCGAAACGAAGACGTACGCTGGCGTCATGAGGGAAGCGTTCGGATCGCCGGGAGCGTTGGCCGCGCAAGTTTGCGTCATCATCACCAACGTTGGGGGCTTAATTCTCTACCTTATCATCATCGGGGATGTACTGTCTGGAAAGCATAATGGAGGTGAAGTGCATTTGGGTATTTTGCAACAGTGGTTTGGAATTCATTGGTGGAATTCCCGGGAATTTGCTCTTCTCTTCATTTTGGTGTTCGTCATGTTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCTGTGGCATTTGTTGGTATATGTTGTGGGTTGGCAATTCTTGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCAGTTGGACCACCAAACCTCTTTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCGTTCACATTTCATTTTAATGTACATCCAATTGGGTTTGAGCTTGCCAAGCCATCTCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACATTACAGTAGGCCTATTTGGGTACCTCTTGTTTGGGGATTCAACCCAATCAGACATTCTCATCAATTTTGACCAGAGTGATGATTCTGTTGTTGGTTCCTTGTTCAATAGTTTGATCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCCCTCTTGAACTTCTCTTTGAGATCCAACATAGATGAAGTTCTCTTCCCCAAAAAGCCTATGCTAGCCACAGACAACAAAAGATTCATGATCCTCACGCTGGTGCTGCTTGTATTCTCCTACCTTGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTTGGATCATCATCTGCAGTGTGCCTTGCCTTCATTTTCCCGGGCTCTATTGTTTTACGGGATGCATATGGTATATCAACAAAAAGGGACAAAATTGTGGCACTGATAATGATTATACTAGCTGTGGTGACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGTAGCAAGTCATAA 1434 0.4672 MEAAVVKSTCTTHLIKKEREGGIFLTKQNHSFSDPHSFTAAMSPSVGVNVPLLGESNGTPPPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPAVAMILVVAVLAELSVEFLMRFTHTGETKTYAGVMREAFGSPGALAAQVCVIITNVGGLILYLIIIGDVLSGKHNGGEVHLGILQQWFGIHWWNSREFALLFILVFVMFPLVLYKRVESLKYSSAVSTLLAVAFVGICCGLAILALVQGKTQTPRLFPQLDHQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSQMTTAVRLALLLCAVIYITVGLFGYLLFGDSTQSDILINFDQSDDSVVGSLFNSLIRVSYALHIMLVFPLLNFSLRSNIDEVLFPKKPMLATDNKRFMILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDAYGISTKRDKIVALIMIILAVVTSVLAISTNIYNAFSSKS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02046 477 Pfam Transmembrane amino acid transporter protein 63 466 IPR013057 -
Spst1g02046 477 PANTHER AMINO ACID TRANSPORTER 56 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02046 Spst-Chr1 28709974 28713237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02046 42 471 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.397 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02046 - - gmx:100815694 752.281