Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02043 ATGGGCTTTGCTTTGCTCATTTGTGGTGTTGTGTGGTTGGAAAGTCTTCTCTTCACTAACTGCTTCATTCTTTTTGTTAACAGAGGAGGGGAAGAAGCAGAAGCAGGAGCCATGGATTGTTGCGTGTGTACAACTATGCCATTGATACTAAGGCCTCCGAGGAATACAATATGTGGGGCATGTTATGAAGGAGTAAGGAGCATAATCAACATGATGAGCAACCTCGAAAGTGAGAAAGTAAAAGCAATAGTGTCCAATCTAAATCCAAACACTTGTCCAGTTGCACGAAAATACTCCAGTAAGGCAAGCTCTAATTCATTTCTTCTATGGTGTTCAGAACAGATTGAACAGTTTAATCAACAAAAGGAAGACTTGGTTTTCCTGAGAGGCTTTATTGCAGCCTTCAAAGCACAGATTCACACAGATATATTGGTCACTCCAGGAAGACATGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCAGCAAGATCAGAGATATTTAAGAACATGTTAGAGTGCGATGAATGCAAAGAAGCACCAAGTAACAGCATAACCATACCAGAATTGAAGCATGAAGAATTAGAGTGTCTGCTTGAGTTTTTATACAGTGGAACCTTGGGAGTTGAAAAATTGGAGAAACATGTGTACGCGTTGTCACAAGCAGCAGATAAGTATGTGATCCCACATCTGCTGAAACATTGTGAAAGGTACCTGCTGAGTTCGCTAAGCACTTGTAATGCCCTTGAGACACTAGAGATTGCGGACACCTGTTCCAACCACAACTTGAAGGAGACAACCTTGAATTTCTTGGTTAAGAACATTGAACATGTTGTGTCCTCACCTAAATTTGAAGCTTTTGTGCACAGGAGTCCACACCTTACTGTGCAACTGGTTACAAGGGTCTTCCTCAATGGTGCCAAATCATCAATTTCTCTCCAAGTTTAA 948 0.4156 MGFALLICGVVWLESLLFTNCFILFVNRGGEEAEAGAMDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNLESEKVKAIVSNLNPNTCPVARKYSSKASSNSFLLWCSEQIEQFNQQKEDLVFLRGFIAAFKAQIHTDILVTPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSNSITIPELKHEELECLLEFLYSGTLGVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTCNALETLEIADTCSNHNLKETTLNFLVKNIEHVVSSPKFEAFVHRSPHLTVQLVTRVFLNGAKSSISLQV 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02043 315 SUPERFAMILY POZ domain 131 241 IPR011333 -
Spst1g02043 315 Gene3D Potassium Channel Kv1.1; Chain A 111 243 IPR011333 -
Spst1g02043 315 Gene3D - 244 310 - -
Spst1g02043 315 ProSiteProfiles BTB domain profile. 141 211 IPR000210 GO:0005515
Spst1g02043 315 CDD BACK 244 284 - -
Spst1g02043 315 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 57 309 IPR044784 -
Spst1g02043 315 SMART BTB_4 141 243 IPR000210 GO:0005515
Spst1g02043 315 Pfam BTB/POZ domain 138 242 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst1g02043 BTB 2.2e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02043 K10523 - gmx:100777561 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02043 1 28694971 28696641 Spst1g02043 1 28694971 28696641 ECH