LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g02014	ATGGCTTCTTCAGCGATGGAAACCTGCAAATCAGAAGATATGCACATGCAGGTGGACATTGAGAAGAACGCACAAGACGTACGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGGCGTGTGGTTGCAGATTCTGTGAGGAAAACCATCTCTCACTATAAACAAAAGTTTTCCTCTCTCACAGATCAACCCTGCACCACAATCCTCCTGTCAGTTCTGCAGGTTGTTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCCACTAAGTTCAGGAAGGATCTTCTTGCAGGCCTCACTATTGCTAGTCTCTGTATTCCCCAGAGCATTGGATATGCAACCTTAGCACATCTTGATCCACAATATGGCCTTTATACAAGTGTGGTACCACCACTTATCTATGCTGTGATGGGAACTTCTAGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCTTTGCTGTTATCCTCAATGATGGAGAAATTAGTAGACCCTGCATCTGATCCAGTGGGTTATACAAAGCTAATTCTGCTTGCTACTCTCTTTGCTGGTATCTTTCAGACTTCCTTCGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTCCTATCCCATGCTGCAATAGTTGGATTTGTGGCAGGAGCAGCCATTGTGATAGGGCTTCAACAGTTGAAGGGACTCTTAGGAATCAGCCATTTTACGACAAAAACCGACATAGTCTCTGTCATGAAAGCTGTCTGGGAAGAAGTTCACAATCCCTGGAACCCTCGAAATTTTATCCTCGGATGCTCGTTCTTGGTCTTCATCCTAACAACGAGATTTCTGGGTAAAAAGAAGAAGAAACTGTTCTGGTTGGCATCAATCTCTCCTCTTGTGTCTGTTATTTTGTCAACTCTACTTGTGTTTTTGACAAGAGCTGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGAGGATTAAATCCAATCTCCATCCATCAGTTAGACTTCAACAGTCCCTACATTGGAGAGGTGGTCAAAATTGCACTAGTGGTTGCTGTCGTTGCCCTTACCGAATCTATTGCTGTTGGGCGATCCTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAAGAGATGATGTCAATAGGTTTGACAAACATCGTAGGATCTTTCACCTCCTGCTACGTCGCAACTGGTTCGTTCTCCCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTGTCAAACATTGTGATGGCCATCACGGTCTTGTTATCACTGCAGTTTTTGACAAAGCTCTTGTATTACACTCCTACAGCTATTCTTGCTTCTGTGATCCTTTCTGCTCTCCCGGGACTTATTGACGTCAGTGAAGCCTACAAAATCTGGAAGGTTGATAAGATAGACTTTCTTGCTTGTGCTGGTGCCTTCTTCGGGGTACTGTTCGCTTCTGTAGAGATTGGTCTGCTAGTGGCGGTGGTTATATCTTTTTCAAAGATCATTCTCATCTCAATTCGACCAGGTACAGAAACTCTGGGAAAACTTCCGGGAACTGATTTGTTCTGCGATGTCTATCAGTATCCCATGGCAGTGACGATTCCCGGGGTTATGATAATACGAGTCAAGTCTGCGTTGCTTTGCTTCGCAAATGCCAATTTCGTTAGAGAAAGGATCATCAAATGGGTCTCCGAGGAAGAATCAGAAGATGACAAGGGAAACTCAAGAAGCACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGAATTTCTTCTCTAGAGGAACTGCATAAGAGTTTGTCTTCAAATGGAAAACAGTTAGCCATTGCGAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTGGGCAAAATTGGTGGCAGAGTATTTCTGACCGTTGAAGAAGCTGTTGGTAGCAAGAGCCGGTGCTAA	1962	0.4434	MASSAMETCKSEDMHMQVDIEKNAQDVRSQWVLNAPEPPSPWRVVADSVRKTISHYKQKFSSLTDQPCTTILLSVLQVVFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLDPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGISHFTTKTDIVSVMKAVWEEVHNPWNPRNFILGCSFLVFILTTRFLGKKKKKLFWLASISPLVSVILSTLLVFLTRADKNGVKIVKHVKGGLNPISIHQLDFNSPYIGEVVKIALVVAVVALTESIAVGRSFASIKGYQLDGNKEMMSIGLTNIVGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLLSLQFLTKLLYYTPTAILASVILSALPGLIDVSEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVTIPGVMIIRVKSALLCFANANFVRERIIKWVSEEESEDDKGNSRSTIQLVILDTSNLVNIDTSGISSLEELHKSLSSNGKQLAIANPRWQVIHKLKVSNFVGKIGGRVFLTVEEAVGSKSRC	653

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Spst1g02014	653	CDD	STAS_SulP_like_sulfate_transporter	527	641	-	-
Spst1g02014	653	FunFam	Sulfate transporter 31	506	652	-	-
Spst1g02014	653	PANTHER	SULFATE TRANSPORTER	60	648	IPR001902	GO:0016020\|GO:0055085
Spst1g02014	653	Pfam	STAS domain	527	646	IPR002645	-
Spst1g02014	653	SUPERFAMILY	SpoIIaa-like	531	647	IPR036513	-
Spst1g02014	653	Gene3D	STAS domain	506	651	IPR036513	-
Spst1g02014	653	NCBIfam	sulfate permease	81	643	IPR001902	GO:0016020\|GO:0055085
Spst1g02014	653	ProSiteProfiles	STAS domain profile.	546	650	IPR002645	-
Spst1g02014	653	Pfam	Sulfate permease family	94	474	IPR011547	GO:0016020
Spst1g02014	653	ProSitePatterns	SLC26A transporters signature.	123	144	IPR018045	GO:0008271\|GO:0008272

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g02014	Spst-Chr1	28381969	28386929	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g02014	25	647	Inorganic Solute Cotransporters	AT5G10180	69.071	0.0	899

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g02014	K17469		-	gmx:100781327	1192.18

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g02014	1	28381969	28386929	Spst1g02014	1	28381969	28386929	ECH

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