Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01984 TTAGTCACTTGCCGACCTCTCTTCTTCGGATTCTCACACGACCCGACCCGAAAGGTCGGAGCGGTTCCAGCGGAGTGCGTCGTGGCTGCGCTGGAGGCTCACGGGATCCGTAACACGAGCGTGGTTGGGCCGAGCTACGGCGGTTTTGTGACGTACGGGATGGCGGCGATGTTCCCGGAGAAGGTGGTGGTGTGCTGCGCCGGAGTTTGCTTGGAAGACAAGGACATGGATGTGGAGGGAATGTTTTGGGTGAAAAGTGTTGAGGAGGTTGCTCCTGAGAAGGTTAGGGAACTGATGCACCTTACCTTTGCCAAACCAAATAAACTCGTGCCGACATGTTTTCTCAAATATTTCAATCAAGCGCAGGTGATGTGTACCAAGTATCGCCAGGAGAGGAAAGAACTCATCAAAGCATTGCACCAGGATAGAAGAAAACTGTCTAATCTTCCTAAGATAACTCAGGTATTCCCACTGGAGTTTAGCACACAGACTGAAGAGATGGCCATTTCACCTTTTGGTAGTACATCAGCTACTCAATGGGGAATTCGTCCTCAGATTTTTGCGGGATCGACTGGGATGGGGAAGATTGCATCATCTAAGAACAATGTTTCAAACAGGATAAGCTTTATGGCTGCCCCAAGTTCAAGCTTCTTTTCTCGAGATTCCTCGCGTGCACTTTTTGATAAAGGTTCATCGCAAAACTTGCATGGTCGCAGGGGATCGAGGTTGATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTTGGGGTCTCAAAAAATGCTAGTAAATCTGAAATCAAGAGTGCTTATCGGAAGCTTGCGAGGAGTTATCATCCTGATGTGAACAAAGAACCTGATGCAGAAAAGAAATTCAAAGAAATTAGTAATGCATATGAGGTCTTGTCAGATGATGAGAAAAGATCCATATATGACACATATGGAGAGGCTGGCCTTAAAGGTTCAGGAATGGGCATGGGGGATTTCAGCAATCCTTTTGACCTATTTGAGACACTGTTTGAGGGCATGGGTGGTATGGGGGGCAGCAGAGGTTCTTGGAATGGAGCAGTTGAGGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTCAAAGAAGCTGTTTTTGGGGTCGAAAAGGAGATTGAGATTCGGCGATTAGAGAGCTGTGGAACTTGCAATGGTTCGGGGGCTAAACCAGGAACCAAATCATCCAAGTGTAGCACTTGTGGTGGTCAGGGCCGGGTTGTCCAATCTACAAGGACTCCATTAGGCATTTTTCAGCAGTCTATGACTTGCTCTTCTTGCAACGGAACTGGAGAAATTTCAACACCTTGCAGTACATGTTCCGGGGAAGGTCGAGTGAGAAAGACAAAGAGGATAAGTATCAAGGTTCCTGCTGGTGTTGATTCTGGCAGCCGGTTAAGGGTCCGAAATGAAGGTAATGCTGGAAGGCGTGGGGGTCCTCCTGGTGACCTTTTTGTTGTTCTTGAAGTTATCCCAGATCCAGTGCTTAAACGGGATGACACAAACATTTTATACACATGTAAGATATCTTATATTGAGGCAATCTTGGGGACTACAGTTAAGGTTCCTACTGTAGACGGCATGGTAGATTTAAAAATCCCAGCTGGGACTCAACCAAGCTCAACACTTGTTATGGCCAAGAAAGGTGTTCCCCTGCTGAATAAAAAGAATCTGAGGGGTGATCAATTGGTTAGGGTGCAAGTTGAAATCCCCAAAAAACTGAGCAAAGATGAGAGAAAACTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCTACCACCAGTGGTAGGAGATAA 1824 0.4622 LVTCRPLFFGFSHDPTRKVGAVPAECVVAALEAHGIRNTSVVGPSYGGFVTYGMAAMFPEKVVVCCAGVCLEDKDMDVEGMFWVKSVEEVAPEKVRELMHLTFAKPNKLVPTCFLKYFNQAQVMCTKYRQERKELIKALHQDRRKLSNLPKITQVFPLEFSTQTEEMAISPFGSTSATQWGIRPQIFAGSTGMGKIASSKNNVSNRISFMAAPSSSFFSRDSSRALFDKGSSQNLHGRRGSRLIVRADADYYSVLGVSKNASKSEIKSAYRKLARSYHPDVNKEPDAEKKFKEISNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGGMGGSRGSWNGAVEGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCGTCNGSGAKPGTKSSKCSTCGGQGRVVQSTRTPLGIFQQSMTCSSCNGTGEISTPCSTCSGEGRVRKTKRISIKVPAGVDSGSRLRVRNEGNAGRRGGPPGDLFVVLEVIPDPVLKRDDTNILYTCKISYIEAILGTTVKVPTVDGMVDLKIPAGTQPSSTLVMAKKGVPLLNKKNLRGDQLVRVQVEIPKKLSKDERKLIEELADLSKGKTATTSGRR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01984 607 FunFam Putative Mitochondrial DnaJ chaperone 441 493 - -
Spst1g01984 607 Hamap Chaperone protein DnaJ [dnaJ]. 247 601 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Spst1g01984 607 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 375 455 IPR036410 -
Spst1g01984 607 Gene3D alpha/beta hydrolase 6 157 IPR029058 -
Spst1g01984 607 Gene3D - 498 606 - -
Spst1g01984 607 Pfam DnaJ C terminal domain 363 578 IPR002939 -
Spst1g01984 607 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 212 602 - -
Spst1g01984 607 FunFam Molecular chaperone DnaJ 380 456 - -
Spst1g01984 607 SUPERFAMILY HSP40/DnaJ peptide-binding domain 503 589 IPR008971 GO:0006457|GO:0051082
Spst1g01984 607 SMART dnaj_3 249 306 IPR001623 -
Spst1g01984 607 SUPERFAMILY Chaperone J-domain 247 349 IPR036869 -
Spst1g01984 607 ProSiteProfiles Zinc finger CR-type profile. 375 456 IPR001305 GO:0031072|GO:0051082
Spst1g01984 607 Gene3D - 358 493 - -
Spst1g01984 607 SUPERFAMILY HSP40/DnaJ peptide-binding domain 356 510 IPR008971 GO:0006457|GO:0051082
Spst1g01984 607 Gene3D DnaJ domain 247 350 IPR036869 -
Spst1g01984 607 FunFam Chaperone protein dnaJ 1, mitochondrial 498 605 - -
Spst1g01984 607 Pfam DnaJ domain 250 311 IPR001623 -
Spst1g01984 607 CDD DnaJ 250 303 IPR001623 -
Spst1g01984 607 PRINTS DnaJ domain signature 270 285 IPR001623 -
Spst1g01984 607 PRINTS DnaJ domain signature 252 270 IPR001623 -
Spst1g01984 607 PRINTS DnaJ domain signature 286 306 IPR001623 -
Spst1g01984 607 PRINTS DnaJ domain signature 306 325 IPR001623 -
Spst1g01984 607 NCBIfam molecular chaperone DnaJ 250 594 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Spst1g01984 607 ProSiteProfiles dnaJ domain profile. 250 314 IPR001623 -
Spst1g01984 607 CDD DnaJ_C 359 581 - -
Spst1g01984 607 ProSitePatterns Nt-dnaJ domain signature. 291 310 IPR018253 -
Spst1g01984 607 CDD DnaJ_zf 388 451 IPR001305 GO:0031072|GO:0051082
Spst1g01984 607 Pfam DnaJ central domain 388 451 IPR001305 GO:0031072|GO:0051082
Spst1g01984 607 FunFam Chaperone protein dnaJ A6 chloroplastic 247 350 - -
Spst1g01984 607 SUPERFAMILY alpha/beta-Hydrolases 24 109 IPR029058 -
Spst1g01984 607 Gene3D - 388 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01984 Spst-Chr1 28064482 28074082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01984 251 313 C2H2 Transcription Factor Family AT1G74250 44.928 7.02e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01984 K03686 - gmx:100786143 803.127