Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01952 ATGGCGGGGGACTATACGATATCCGAAGAAAAGATCTTTAAACAGAGGCTTGCAAGGTTTAGAGTTTGTGCACTGAGAAAGAAACTAAGGGAGTGTTCCGGCGACATCGAGGAGTCATCTCCGTCCACCTTTGACATTCAGAGGAAGCTCGTGAAGATCGGTTTCACCGCCGCTTCCTCCGGCACGGTTCAGTCCTATTTCTCTCCAATTTCCCCTTCCTCTGCCGTTGAATTGGAGAGAAAATGTGAATGGAATTGGAGTGTACATTCCCGCGTTTTGCGTGTTGCGGATTTGATTCTAATAGTCGTAGTTGTGGGCGGAGCAGTATTTATTGCAGGTGGTGTAGCTGCCGCAGCTGCTCCGCAGAAGGTGCTGGAGAAGCTCCCCGGCTGCAGAGAAGAAAGAAGAAAAAGTTGA 417 0.494 MAGDYTISEEKIFKQRLARFRVCALRKKLRECSGDIEESSPSTFDIQRKLVKIGFTAASSGTVQSYFSPISPSSAVELERKCEWNWSVHSRVLRVADLILIVVVVGGAVFIAGGVAAAAAPQKVLEKLPGCREERRKS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01952 138 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 32 76 IPR044252 GO:0003735|GO:0005840
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01952 30 76 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 55.319 7.32e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01952 K02942 - gmx:100804776 58.5362