Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01937 ATGGCAGCTCTGTTACCTTGCGCGCCCAACGTAGTCTCTGCTCCGTTCGGGAACCGGTGCACGAGCCGCCTCCCGAACCGGCCTCCATCCCTCGCCTTCTCCGGTACGACCAGACACTTTCTCCGCGGTTCGCTCTCTGTCGCCCGGTTCGGACTCAAACCCGGTTTCTTGCCCGAGCCGGAGGACGCTGAAGGCGTGCTCAGAGAACTGTTTGCCCGAGCGGAGGGACTTCTTTACACGATTGCCGACGCTGCTGTTTCTTCTTCTTCCGACACGGTTGCGGCTTCTGCCACCGCCAAACAGAGCAACGACTGGCTTTCCGGAATAACCAATTACATGGAGACGATTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCATATGCGTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACGTTTCCTTTAACCAAAAAACAGGTAGAATCTGCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGATTGTATAAACTAGCCAACATTAATCCTCTTGCAGGATGCCTGCCCACACTCGCAACAATACCAGTGTGGATTGGGCTATATAGAGCCCTTTCAAATGTGGCAGACGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAGAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCTCCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCTGTGTTGCTGGTCGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCAGTCAGGCAAGTCCCAGGTGATATCATGAAGAATGACGTAACACAGGTTCAGAAGTCAATATCTAAACTAAATTCCACAGCAGCGGAAGAAACCAGACAAAATGAGAAAAAATCAGAGGGGCCACGAGCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGCGAAGACAACAAAGAGAAGAAGAAAAAAGAAAAAGCATGGAAGCAGCAGCTAGAGAAACTAAAGTAAATGAGAGTCACGAGTCACTTGAGAAAACTGGAGGTGATTTAGTTGTTGAAAAACCTCTGTCTGTGGCTTCAGACACTGATCCCTCCATATCTGGAGTAGTAAATGGTAACCTTTTAGGTAAAGACTTGGATGGAAATCAGAATTCTACATCTACATCTGAGACAGAAAATAATGAAGGTTCTACACATTCCAACAATGTTGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTTCAACCACTACAAACAGACAAGCTCCTGCAGAAGATGCAGAACGCATGACAAAGGATTGA 1608 0.459 MAALLPCAPNVVSAPFGNRCTSRLPNRPPSLAFSGTTRHFLRGSLSVARFGLKPGFLPEPEDAEGVLRELFARAEGLLYTIADAAVSSSSDTVAASATAKQSNDWLSGITNYMETILKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQIKAIQERYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGLPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPGDIMKNDVTQVQKSISKLNSTAAEETRQNEKKSEGPRAGDRFKQLKEQEARRRQQREEEKRKSMEAAARETKVNESHESLEKTGGDLVVEKPLSVASDTDPSISGVVNGNLLGKDLDGNQNSTSTSETENNEGSTHSNNVEINEKNSDKEPREVLTSSTTTNRQAPAEDAERMTKD 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01937 535 MobiDBLite consensus disorder prediction 512 526 - -
Spst1g01937 535 Coils Coil 401 426 - -
Spst1g01937 535 PANTHER OXA1 82 411 IPR001708 GO:0016020|GO:0032977
Spst1g01937 535 MobiDBLite consensus disorder prediction 377 535 - -
Spst1g01937 535 NCBIfam membrane protein insertase YidC 133 347 IPR028055 -
Spst1g01937 535 Pfam 60Kd inner membrane protein 133 347 IPR028055 -
Spst1g01937 535 CDD 5TM_YidC_Alb3 134 347 IPR047196 -
Spst1g01937 535 CDD UDM1_RNF168_RNF169-like 359 429 - -
Spst1g01937 535 MobiDBLite consensus disorder prediction 383 444 - -
Spst1g01937 535 MobiDBLite consensus disorder prediction 473 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01937 Spst-Chr1 27593032 27602004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01937 70 419 Chloroplast and Mitochondria Gene Families AT2G28800 56.695 3.08e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01937 K03217 - gmx:100802546 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01937 1 27593032 27602004 Spst1g01937 1 27593032 27602004 ECH