Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g01929 | ATGCAAGCCCTAAATACAATGGGTTTATGGTCTCTCTTTCTGGTTACATTTCTTCTGGTGCTAACATCATATGTGGTTTGCCAACTTGAAGAATTTATCAGTATTGACTGTGGAGGGACAAGTAACTACACTGATAAAAGCACAGGGCTTTCATGGATATCAGATTCTGGGATGATGAAGCATGGCAAGTCAGTGGAGGTACAAAGTCCAAGTGGAAACAAGGTTCAGTATCAGAGACGCCGAGACTTTCCAATAGACAGCAGAAAATACTGTTATACACTTGGCTCTAAGGAGAGAAGAAGATATCTAGTGCGAGCAACGTTTCAGTATGGTAGCTTGGATGATGGAGACACATACCCTCAGTTTCAGCTTTATTTGGATGCAACCAAATGGGCTACTGTGTCAATATATGATGCCTCAAGAATTTATGTGAAGGAAATGATCTTCAGGGCACCCTCTAACTCTATTGATGTTTGCATGTGCTGTGCTACCACCGGTTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGGGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTTCAAGTGAGGATGTAGTCAGGTATCCAGATGATCCATACGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAACTATCTTGTTGGGGTGGCCCCAGGCACTGAAAGAATTAACACAACAAAGAAAATAAAAATAGAGACAAGAGAATATCCCCCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACAAAAGGAGTTCTTAGCTATAGACTAAACCTGGAAGACTTCCCTGGAAATGCTAGAGCCTATGCATATTTTGCAGAGATTGAAGATCTGGCTAAGAATGAAACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTATAGTAATGCAGTGGTGAACATTGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAGCCAAGTTACATGAACGTGAGTCTTGAGTTTGTGCTTTCGTTCTCCTTTGTTCAGACCCGAGATTCTTCTCAGGGACCTCTTCTAAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCCAAGACTGTCAGACAAGATTCAAATTCTGTAAATGCGTTTCTCTTCTTATCCGCTGAAAGTGTCCTGCAGAATGAAGGTGATCCCTGTATTCCAACTCCCTGGGAGTGGGTAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATAAACCTTTCAAGAAGGAATCTGAAGGGTGAAATCCCATGGGAGCTCAACAACGTGGAATCATTGACAGAGCTGTGGTTAGATGGCAACTTGCTTACAGGACAGCTTCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAGATTCACTGGTCCATTACCATCTTACTTGGGTAGTTTGCCAAGTTTACAAGCCCTGTTCATACAGAATAACTCTTTTAGTGGGGCAATACCATCAGAGTTACTGTCTGGCAAAATAATTTTCAACTTTGATGATAATCCCGAACTGCATAAAGGGAACAAGAAGCATTTTCAGTTGATGCTAGGAATTTCTATTGGAGTACTAGTGATTCTATTAATATTATTCTTAACAAGTTTGGTGCTATTGCTTAATCTGCGGAGAAAAACATCTCGACAGAAACGAGATGAAAAGGGTATTTCTGGACGCTGCAGTACTAAACCTTTAACTGGATACTCATTTGGTCCGGGTGGAAATTTAATGGACGAAGGTACTGCTTACTATATTACACTGTCTGAGTTGACAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGGGATGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCATGAATGTTCGAGCCAGAAGCAATTGGATTGGTTAGCTCGCCTTAGAATTGCAGAAGATGCAGCTAAAGGTCTTGAATATTTACACACAGGATGCAATCCTAGTATCATTCACCGTGATGTGAAGACAAGCAATATCCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGACTTGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTACCTGGATCCTGAGTACTATGCAAATCAGCAATTGACTGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTCTGCTGGAACTGATATCAGGAAAAAAACCTGTATCTTCAGAAGATTATGGTCCCGAAATGAATATTGTTCACTGGGTAAGATCCTTAATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTTGTGGGGAATGCCAAAACAGAGTCAGTTTGGAGGGTAGTTGAAATCGCCATCCAGTGTGTAGAACAACACGGTGCCTCCAGGCCAAGAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAACATTGAAAAAGGTTCAGAAAGTCAACTTAAGTTATCATCTTCAGGAGGTTCAAAGCCACAGTCTTCACGTAAGACTTTGCTTGCAAGCTTTCTAGAAATTGAGAGTCCTGACTTGTCAAATAGTTGCCTCCCCTCAGCCAGATAA | 2811 | 0.4048 | MQALNTMGLWSLFLVTFLLVLTSYVVCQLEEFISIDCGGTSNYTDKSTGLSWISDSGMMKHGKSVEVQSPSGNKVQYQRRRDFPIDSRKYCYTLGSKERRRYLVRATFQYGSLDDGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIFRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEGSFFLKVAARINFGASSEDVVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKKIKIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPGNARAYAYFAEIEDLAKNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVQTRDSSQGPLLNAMEISKYVQIASKTVRQDSNSVNAFLFLSAESVLQNEGDPCIPTPWEWVNCSTTTPPRITKINLSRRNLKGEIPWELNNVESLTELWLDGNLLTGQLPDMSNLINLKIVHLENNRFTGPLPSYLGSLPSLQALFIQNNSFSGAIPSELLSGKIIFNFDDNPELHKGNKKHFQLMLGISIGVLVILLILFLTSLVLLLNLRRKTSRQKRDEKGISGRCSTKPLTGYSFGPGGNLMDEGTAYYITLSELTEATNNFSKKIGKGSFGSVYYGKMRDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVRSLIRKGDVISIMDPSLVGNAKTESVWRVVEIAIQCVEQHGASRPRMQEVILAIQDASNIEKGSESQLKLSSSGGSKPQSSRKTLLASFLEIESPDLSNSCLPSAR | 936 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g01929 | 936 | Gene3D | Phosphorylase Kinase; domain 1 | 594 | 689 | - | - | |
Spst1g01929 | 936 | SMART | serkin_6 | 614 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g01929 | 936 | Pfam | Protein tyrosine and serine/threonine kinase | 616 | 881 | IPR001245 | GO:0004672|GO:0006468 | |
Spst1g01929 | 936 | Gene3D | Transferase(Phosphotransferase) domain 1 | 690 | 904 | - | - | |
Spst1g01929 | 936 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 416 | 506 | - | - | |
Spst1g01929 | 936 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 690 | 897 | - | - | |
Spst1g01929 | 936 | SUPERFAMILY | Protein kinase-like (PK-like) | 598 | 881 | IPR011009 | - | |
Spst1g01929 | 936 | FunFam | serine/threonine-protein kinase PBS1-like | 593 | 689 | - | - | |
Spst1g01929 | 936 | ProSiteProfiles | Protein kinase domain profile. | 614 | 890 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g01929 | 936 | SUPERFAMILY | L domain-like | 405 | 525 | - | - | |
Spst1g01929 | 936 | Pfam | Malectin-like domain | 35 | 368 | IPR024788 | - | |
Spst1g01929 | 936 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 735 | 747 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g01929 | 936 | PANTHER | OS07G0107800 PROTEIN-RELATED | 462 | 887 | - | - | |
Spst1g01929 | 936 | ProSitePatterns | Protein kinases ATP-binding region signature. | 620 | 642 | IPR017441 | GO:0005524 | |
Spst1g01929 | 936 | Gene3D | Ribonuclease Inhibitor | 374 | 528 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g01929 | Spst-Chr1 | 27543203 | 27548670 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g01929 | 7 | 936 | Receptor kinase-like Gene Family | AT1G67720 | 68.810 | 0.0 | 1287 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Spst1g01929 | Malectin_like | 1.2e-90 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g01929 | - | - | gmx:100807148 | 1674.83 |