Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01929 ATGCAAGCCCTAAATACAATGGGTTTATGGTCTCTCTTTCTGGTTACATTTCTTCTGGTGCTAACATCATATGTGGTTTGCCAACTTGAAGAATTTATCAGTATTGACTGTGGAGGGACAAGTAACTACACTGATAAAAGCACAGGGCTTTCATGGATATCAGATTCTGGGATGATGAAGCATGGCAAGTCAGTGGAGGTACAAAGTCCAAGTGGAAACAAGGTTCAGTATCAGAGACGCCGAGACTTTCCAATAGACAGCAGAAAATACTGTTATACACTTGGCTCTAAGGAGAGAAGAAGATATCTAGTGCGAGCAACGTTTCAGTATGGTAGCTTGGATGATGGAGACACATACCCTCAGTTTCAGCTTTATTTGGATGCAACCAAATGGGCTACTGTGTCAATATATGATGCCTCAAGAATTTATGTGAAGGAAATGATCTTCAGGGCACCCTCTAACTCTATTGATGTTTGCATGTGCTGTGCTACCACCGGTTCTCCCTTCATATCTACCCTTGAACTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAGGGCAGTTTCTTCTTGAAAGTGGCTGCAAGAATTAACTTTGGTGCTTCAAGTGAGGATGTAGTCAGGTATCCAGATGATCCATACGATAGAATTTGGGAGTCTGATCTTATTAAAAGACAAAACTATCTTGTTGGGGTGGCCCCAGGCACTGAAAGAATTAACACAACAAAGAAAATAAAAATAGAGACAAGAGAATATCCCCCTGTTAAAGTGATGCAAACTGCAGTTGTTGGCACAAAAGGAGTTCTTAGCTATAGACTAAACCTGGAAGACTTCCCTGGAAATGCTAGAGCCTATGCATATTTTGCAGAGATTGAAGATCTGGCTAAGAATGAAACTAGAAAATTCAAATTGGAGCAACCTTACATAGCTGACTATAGTAATGCAGTGGTGAACATTGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAGCCAAGTTACATGAACGTGAGTCTTGAGTTTGTGCTTTCGTTCTCCTTTGTTCAGACCCGAGATTCTTCTCAGGGACCTCTTCTAAATGCAATGGAAATAAGCAAATACGTGCAAATTGCTTCCAAGACTGTCAGACAAGATTCAAATTCTGTAAATGCGTTTCTCTTCTTATCCGCTGAAAGTGTCCTGCAGAATGAAGGTGATCCCTGTATTCCAACTCCCTGGGAGTGGGTAAATTGTAGTACAACTACACCTCCAAGAATTACAAAGATAAACCTTTCAAGAAGGAATCTGAAGGGTGAAATCCCATGGGAGCTCAACAACGTGGAATCATTGACAGAGCTGTGGTTAGATGGCAACTTGCTTACAGGACAGCTTCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAGATTCACTGGTCCATTACCATCTTACTTGGGTAGTTTGCCAAGTTTACAAGCCCTGTTCATACAGAATAACTCTTTTAGTGGGGCAATACCATCAGAGTTACTGTCTGGCAAAATAATTTTCAACTTTGATGATAATCCCGAACTGCATAAAGGGAACAAGAAGCATTTTCAGTTGATGCTAGGAATTTCTATTGGAGTACTAGTGATTCTATTAATATTATTCTTAACAAGTTTGGTGCTATTGCTTAATCTGCGGAGAAAAACATCTCGACAGAAACGAGATGAAAAGGGTATTTCTGGACGCTGCAGTACTAAACCTTTAACTGGATACTCATTTGGTCCGGGTGGAAATTTAATGGACGAAGGTACTGCTTACTATATTACACTGTCTGAGTTGACAGAAGCTACTAATAATTTCTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGGGATGGAAAAGAGGTGGCAGTTAAGACTATGACTGATCCATCCAGCTATGGGAACCAGCAATTTGTAAATGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTGGTTTATGAGTATATGCACAATGGCACTTTAAGGGAGTACATTCATGAATGTTCGAGCCAGAAGCAATTGGATTGGTTAGCTCGCCTTAGAATTGCAGAAGATGCAGCTAAAGGTCTTGAATATTTACACACAGGATGCAATCCTAGTATCATTCACCGTGATGTGAAGACAAGCAATATCCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGACTTGCTGAAGAAGATTTAACACACATATCAAGTGTTGCAAGGGGAACTGTAGGTTACCTGGATCCTGAGTACTATGCAAATCAGCAATTGACTGAAAAGAGTGACGTGTATAGTTTTGGAGTTGTTCTGCTGGAACTGATATCAGGAAAAAAACCTGTATCTTCAGAAGATTATGGTCCCGAAATGAATATTGTTCACTGGGTAAGATCCTTAATTCGTAAAGGAGATGTGATAAGCATCATGGATCCTTCCCTTGTGGGGAATGCCAAAACAGAGTCAGTTTGGAGGGTAGTTGAAATCGCCATCCAGTGTGTAGAACAACACGGTGCCTCCAGGCCAAGAATGCAAGAGGTCATTTTGGCCATACAAGATGCTTCTAACATTGAAAAAGGTTCAGAAAGTCAACTTAAGTTATCATCTTCAGGAGGTTCAAAGCCACAGTCTTCACGTAAGACTTTGCTTGCAAGCTTTCTAGAAATTGAGAGTCCTGACTTGTCAAATAGTTGCCTCCCCTCAGCCAGATAA 2811 0.4048 MQALNTMGLWSLFLVTFLLVLTSYVVCQLEEFISIDCGGTSNYTDKSTGLSWISDSGMMKHGKSVEVQSPSGNKVQYQRRRDFPIDSRKYCYTLGSKERRRYLVRATFQYGSLDDGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIFRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEGSFFLKVAARINFGASSEDVVRYPDDPYDRIWESDLIKRQNYLVGVAPGTERINTTKKIKIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPGNARAYAYFAEIEDLAKNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVQTRDSSQGPLLNAMEISKYVQIASKTVRQDSNSVNAFLFLSAESVLQNEGDPCIPTPWEWVNCSTTTPPRITKINLSRRNLKGEIPWELNNVESLTELWLDGNLLTGQLPDMSNLINLKIVHLENNRFTGPLPSYLGSLPSLQALFIQNNSFSGAIPSELLSGKIIFNFDDNPELHKGNKKHFQLMLGISIGVLVILLILFLTSLVLLLNLRRKTSRQKRDEKGISGRCSTKPLTGYSFGPGGNLMDEGTAYYITLSELTEATNNFSKKIGKGSFGSVYYGKMRDGKEVAVKTMTDPSSYGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLREYIHECSSQKQLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWVRSLIRKGDVISIMDPSLVGNAKTESVWRVVEIAIQCVEQHGASRPRMQEVILAIQDASNIEKGSESQLKLSSSGGSKPQSSRKTLLASFLEIESPDLSNSCLPSAR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01929 936 Gene3D Phosphorylase Kinase; domain 1 594 689 - -
Spst1g01929 936 SMART serkin_6 614 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01929 936 Pfam Protein tyrosine and serine/threonine kinase 616 881 IPR001245 GO:0004672|GO:0006468
Spst1g01929 936 Gene3D Transferase(Phosphotransferase) domain 1 690 904 - -
Spst1g01929 936 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 416 506 - -
Spst1g01929 936 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 690 897 - -
Spst1g01929 936 SUPERFAMILY Protein kinase-like (PK-like) 598 881 IPR011009 -
Spst1g01929 936 FunFam serine/threonine-protein kinase PBS1-like 593 689 - -
Spst1g01929 936 ProSiteProfiles Protein kinase domain profile. 614 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01929 936 SUPERFAMILY L domain-like 405 525 - -
Spst1g01929 936 Pfam Malectin-like domain 35 368 IPR024788 -
Spst1g01929 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Spst1g01929 936 PANTHER OS07G0107800 PROTEIN-RELATED 462 887 - -
Spst1g01929 936 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Spst1g01929 936 Gene3D Ribonuclease Inhibitor 374 528 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01929 Spst-Chr1 27543203 27548670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01929 7 936 Receptor kinase-like Gene Family AT1G67720 68.810 0.0 1287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst1g01929 Malectin_like 1.2e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01929 - - gmx:100807148 1674.83