Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01917 ATGGAAGAGGAAATCAAATCCGAATTCAAAAGAAGCGGTTTCGACATCGAAGACGAACAAGAAATTATCAGCAAATGTGTTACTTTCTGCATCAACTACAGTCTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTCATTACCTCAACAGACAGCTGAATGAACCAATAGTAGAAAGTGCTGAAATTGATGGCTTTCTATTGCATCTACAAAATCAGAAGAAAGAGGACGTTATAAAGGAAAAGGAGGAAGCTGGCTTGCATATGTACTCTATCGGAGATGTAGAAATGCTCTTAAATAATGATGATGACACAAAGGACAATACTCCTGGAACTCCAATAAATCATCATCATGATCTTTTTTCTCCTTCCACTGATACAACATCTTTGATGTATGAGAATGTTTTATCTTCTGGGAAAGCGTCAAAATCAAAACTTATAACACCCTTTTCAAAGCGAACAGATAGATTTTCGGTGAAATTTAGCATCAACACTGTCCCTAGTGTAGAGAATGGGAAACAAGAACCTAATCATCAGGATAATGAGAATGATGAAGATGATGTTGTTAGAAGAGTTCCACATCGTGAAAGGTGTTCCTTGGTCATTCATGGATCAGGGCTCAAACCAGGTTGCAGATTCATGTATGATAGAATAGAGGATAGGCTTAATGCAATTGAAAACCGAATTAGAAAACATACAAGGGCATTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAACTGCTTCACAGAGGGGCATTTTTGCTGTTGGCATGATTTGTTCTGATGGAGAAGGCCGTTTAAATGAGAAGTCCGTCGTGCTTCAGAGCAGTATTGAACATTCTGGAGGGGAATGTGTTCGCCTGGACTTGCAACACTTAAACCATTATTCAATTTTTCCTGGTCAGGTAGTTGGTATAGGAGGACATAATCCTAGTGGGCACTGCTTCATTGCATCTAAATTGGTGGATTCTATTCCAATGTCTGTTGCTGATGAGAATTTGAATCCGGCGAAGAAGCAAGCTATTGATAAGGAGAATCCGTCTACTGATCTGCTTTGTAAACAGAGAGAGTTATCAATGATTATTTCAGCTGGCCCCTTTACTACAACAGACAATTTATTGTTTGAGCCTCTTACAGAACTGCTGCAATATGCAAAACGAAGACAGCCGCAGTTACTTGTATTGCTGGGACCGTTTGTTGACTCTGAACACCCAGATATTAAGAAAGGAACGGTAGAGAGGAGTTTTGATGAAATATTTCATTTTGAAATCCTGAGGAAGTTGGAAGATTATGTAGAACGCGTGGGTTCTGGAACACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAATCATGATTTTGTTTTTCCTCAGCCTGCATTGGAAATCAATTCAACTGACTTCAAATCTCAGATAGTCAGTCTCACTAATCCTGGAATCTTTGAGGCCAATGAGGTTAAGGTTGGTTGCTGCACCGTGGATATTCTCAAGCAAATCAGTGGGGAGGAGATATCGCGAACTGCGGCTGATGGAAAACCCATGGATCGCATGAGTAGACTTGCAAACCATATTCTTAACCAACAAAGCTTCTATCCACTTCACCCACCATCAGAATTTGTTCCTATGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTTTCATTGGTTCCAGACATACTTATCCTACCTTCAGACATCAAGTACTTTGTCAAGTTGCTTAGCAGTGAAAGTGAAGGGATAAACAACACCAAATGCATAGCTGTCAATCCGGGAAGACTAGCCAAAGGAGAAGGAGGGGGAACTTTTGTCGAGCTTGATTATTGTGGGGGTTCCGACCAAATTAACGTTTCAATTGTTGGCATATGA 1875 0.4085 MEEEIKSEFKRSGFDIEDEQEIISKCVTFCINYSLTPSDLVSSWEVHYLNRQLNEPIVESAEIDGFLLHLQNQKKEDVIKEKEEAGLHMYSIGDVEMLLNNDDDTKDNTPGTPINHHHDLFSPSTDTTSLMYENVLSSGKASKSKLITPFSKRTDRFSVKFSINTVPSVENGKQEPNHQDNENDEDDVVRRVPHRERCSLVIHGSGLKPGCRFMYDRIEDRLNAIENRIRKHTRAFVASGLYEEPTDPTTASQRGIFAVGMICSDGEGRLNEKSVVLQSSIEHSGGECVRLDLQHLNHYSIFPGQVVGIGGHNPSGHCFIASKLVDSIPMSVADENLNPAKKQAIDKENPSTDLLCKQRELSMIISAGPFTTTDNLLFEPLTELLQYAKRRQPQLLVLLGPFVDSEHPDIKKGTVERSFDEIFHFEILRKLEDYVERVGSGTRVLLVPSIRDANHDFVFPQPALEINSTDFKSQIVSLTNPGIFEANEVKVGCCTVDILKQISGEEISRTAADGKPMDRMSRLANHILNQQSFYPLHPPSEFVPMDFSLAPEALQLSLVPDILILPSDIKYFVKLLSSESEGINNTKCIAVNPGRLAKGEGGGTFVELDYCGGSDQINVSIVGI 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01917 624 FunFam DNA polymerase alpha subunit B 1 76 - -
Spst1g01917 624 Gene3D - 1 66 IPR043034 -
Spst1g01917 624 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 610 IPR016722 -
Spst1g01917 624 MobiDBLite consensus disorder prediction 165 187 - -
Spst1g01917 624 Pfam DNA polymerase alpha/epsilon subunit B 364 574 IPR007185 GO:0003677|GO:0006260
Spst1g01917 624 Gene3D - 343 510 - -
Spst1g01917 624 Gene3D - 514 618 - -
Spst1g01917 624 PIRSF DNA_pol_alpha_2 1 611 IPR016722 -
Spst1g01917 624 FunFam DNA polymerase alpha subunit B 344 509 - -
Spst1g01917 624 Coils Coil 215 235 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01917 2 624 Core DNA Replication Machinery Family AT1G67630 58.214 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01917 K02321 - gmx:100795306 1041.57