Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01873 ATGGCAGGCTTGGAGTACAACATCGATGAACTGTTCCAAGAAGCTAAGAAGCGATGGCTCAAGCCTGTGGAGGTGCTTTACATTTTAAGGAATCACGACCGGTGCGAGCTCACTCACCAGCCTCCTCATCAGCCAACTGGCGGATCCCTGCTTCTGTTTAATAGAAGAGTCACGCGTTTCTTCCGTAAAGATGGTCATAACTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCACATGAACGGCTTAAGGTCTGTCTAACTACCTATGGTGTTATGATCATTAAAATGACCTAA 300 0.4633 MAGLEYNIDELFQEAKKRWLKPVEVLYILRNHDRCELTHQPPHQPTGGSLLLFNRRVTRFFRKDGHNWRKKKDGRTVGEAHERLKVCLTTYGVMIIKMT 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01873 99 SMART CG_1_2 11 97 IPR005559 GO:0003677
Spst1g01873 99 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 86 - -
Spst1g01873 99 Pfam CG-1 domain 14 87 IPR005559 GO:0003677
Spst1g01873 99 ProSiteProfiles CG-1 DNA-binding domain profile. 8 99 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01873 Spst-Chr1 26915618 26916033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01873 4 86 CAMTA Transcription Factor Family AT1G67310 63.855 2.82e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01873 K21596 - gmx:100791430 171.014