Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01868 ATGTTGAAATCCTTAAGGAAAAGCCTAACAAGGCTTCAACACAAGTGTGTGAATAAGCAGAGGAGTGAAGGTGATAGGAGTGTGTCAGTGCATGGTGAAGACTTGGTTGGTTTGCCTGTGCAGTGTTGCAATTGTTGCATAGAGGAAACCAAACAGTGCAATTGTGACCACATTCATGCCGCAGAAGACGTAAATGTCGACTCTCAGCGTGATGCTAACGCCAACAGTTCTTTTGTTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTATCAACACCATATGCTGTAGAAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTATAGGACTAGGGGTGATGTGTGCTTATAGTTCTCACATACTTGGAAGATGCCTTAGAATGAATCCCAAGTTAAGAAGCTTTGTGGAGATTGGGAAGCATGCATTTGGATCAAAAGGAAGATTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGACCACAGTGTTTCTGGGGATAAATCTGAAGCTGCACTTCCCTATATTCTCCTCGTCGCAGCTCCTAACTGTGGTGGCAGTCCTCATTGCCCTCCCTAGTTTATGGATCAGAGACCTTTCTTCCATATCTTTCCTTTCAGGTGTTGGTATTCTCATGTCCCTACTCATTTTTCTGTGTGTAGCAGCCACTGCACTTTTAGGTCATGTCCAATCTAATAACCATACCATACCTGTTCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTCGGCTATGGAGGACATATTGTTTTCCCTGAATTATATACAGCCATGAAAGATCCCTCCAAATTTACCAAGGTTTCTATTGTGAGCTTCGCAGTGGTGACAGCAATTTACACAACGCTGGGGTTTATGGGTGCAAAGATGTTTGGTAAGGATGTGAAGTCTCAGATAACTCTTAGCATGTCGCCGGAGCACATTGTGACAAAGATTGCTCTGTGGGCAACCGTGGTAGCACCAATGACCAAATACGCACTTGAATTCACACCTTTCGCCATTCAACTAGAACATTCACTTCCAAGCTCCATGAGTGGCAGAACCAAAATGATAATTAGGGGTTGCGTAGGTTCATTTTCACTTTTGGTCATACTAACCCTGGCTCTCTCGGTTCCTTATTTCGAACATGTACTAAGTCTCACTGGTTCCCTTGTTAGTGTTGCCGTTTGTTTAATCTTGCCATGTGCTTTCTATGTGAAGATATGTTGGGGTCAAATATCAAACCCTATCTTGCTCCTAAACCTCTTTCTCATCACATTTGGCTTTGTTCTTGCTGTGATAGGCACCATTTCCTCCTCAAAGTTGCTACTCAAAAGTTTTCAATTGCATCACTCAAGTTAG 1422 0.4318 MLKSLRKSLTRLQHKCVNKQRSEGDRSVSVHGEDLVGLPVQCCNCCIEETKQCNCDHIHAAEDVNVDSQRDANANSSFVHAVINMVGMLIGLGQLSTPYAVESGGWVSAFLLIGLGVMCAYSSHILGRCLRMNPKLRSFVEIGKHAFGSKGRLVAATIIYMEIFMSLVSYTISLHDNLTTVFLGINLKLHFPIFSSSQLLTVVAVLIALPSLWIRDLSSISFLSGVGILMSLLIFLCVAATALLGHVQSNNHTIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTAMKDPSKFTKVSIVSFAVVTAIYTTLGFMGAKMFGKDVKSQITLSMSPEHIVTKIALWATVVAPMTKYALEFTPFAIQLEHSLPSSMSGRTKMIIRGCVGSFSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCAFYVKICWGQISNPILLLNLFLITFGFVLAVIGTISSSKLLLKSFQLHHSS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01868 473 Pfam Transmembrane amino acid transporter protein 75 457 IPR013057 -
Spst1g01868 473 PANTHER AMINO ACID TRANSPORTER 67 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01868 Spst-Chr1 26850969 26853220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01868 43 471 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.465 1.66e-171 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01868 - - gmx:100790897 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01868 1 26850969 26853220 Spst1g01868 1 26850969 26853220 ECH