Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01846 ATGGGAAGTAAGGGATTGAAGGAGTTCCAAGCAGAAATTGCAGTTCTGAGTAAAGTGAGGCACAGGCATTTGGTGGCTTTGTTAGGGCATTGTATTACCAAAAGCGAAAGGTTTTTGGTGTACGAGTATATGCCTCAAGGGACATTAACACAACATCTGTTCTCTTGGCGTGAAAATGGCACTGCTCCATTAACTTGGAAACAAAGGTTAGCAATAGCCTTGGATGTAGCACGAGGAGTGGAATATATGCACCGTCTAGCTCCGCAAAGCTTCATTCACAGGGACTTAAAACCCTCAAACATATTATTGGGTGCTGACATGAGAGCCAAGGTTGCGGATTTTGGTTTGGTTAAAACTATTGCGCCTGGTGGAAAGGATTCTGTCTGGACTCGAGTGGCTGGAACATTTGGATATCTGGAACCTGAATATGCAGCTACTGGAAGAGTGACGACCAAAGTGGATGTATACGCATTCGGTATAGTTTTGATGGAACTGATTACCGGTAGAAAGGCATTTGATAATACTCTGCCAGAACAAATGTCTCACTTGGTTTCATGGTTCCGCAGTAGGATAGTACATAACATGGAGAACATCACAGAGGCAATTGATGAAACTCTCAATCTTGACGATGAAAGCATGGAGAGCATATGTAAAGTGGCTGAGCTGGCAGGCCATTGCACTGCTCCTGAACCAAAGAAAAGGCCCGAAATGGGGCATGCAGTGAATGTATTGGTTCCTCTGGTAGAGCAATGGAACGCTACCTGCAGCCATGCAGAAGAAGAAGAAGGTTTTTGTGATATGATCTATGAAGGAACTAACGACATGTCCATGTCGGAAATTCTGTCGGGCCGTTGA 855 0.4456 MGSKGLKEFQAEIAVLSKVRHRHLVALLGHCITKSERFLVYEYMPQGTLTQHLFSWRENGTAPLTWKQRLAIALDVARGVEYMHRLAPQSFIHRDLKPSNILLGADMRAKVADFGLVKTIAPGGKDSVWTRVAGTFGYLEPEYAATGRVTTKVDVYAFGIVLMELITGRKAFDNTLPEQMSHLVSWFRSRIVHNMENITEAIDETLNLDDESMESICKVAELAGHCTAPEPKKRPEMGHAVNVLVPLVEQWNATCSHAEEEEGFCDMIYEGTNDMSMSEILSGR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01846 284 Gene3D Transferase(Phosphotransferase) domain 1 45 271 - -
Spst1g01846 284 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Spst1g01846 284 Pfam Protein kinase domain 7 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01846 284 SUPERFAMILY Protein kinase-like (PK-like) 4 244 IPR011009 -
Spst1g01846 284 FunFam PTI1-like tyrosine-protein kinase 3 44 258 - -
Spst1g01846 284 PANTHER OSJNBA0070M12.3 PROTEIN 1 278 - -
Spst1g01846 284 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01846 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Spst1g01846 284 SMART serkin_6 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01846 Spst-Chr1 26629776 26630803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01846 2 248 Receptor kinase-like Gene Family AT3G58690 42.169 1.29e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Spst1g01846 Pkinase 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01846 K00924 - gmx:100286794 410.223