Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01820 ATGAATTTCTACGCAAATGAAACGGCGTTCCTCTCAGTGACGGAAGTGGATGAAAGGAGTCGAAGGTACCAGGTATGCTATGCTGCGCCACCCCATATTGTTTCAGATGGGTTATGGCGCAGCAAACCAAATACAAGGTCTCCAATGAAATCTTTTCTCCCCTTGTTTGAGTTACAAGTCCTTCTAATATTCGTCGTCACCCAAATCTGCCGTCTCCTCCTCCTGCCCTTGAAACTCCCACTCTTCATTTCACAGATGATGGCTGGGCTAATTCTGCAAGCTCTTTTTGCGGTGGAACCACTGGGCACATACATGAGGATGCTGTTTCCGTATGGAACTCATGACACGATCACAACAATATCATCCATTGGTTTTGTCCTTTTCATTTTCATAAACGGTGTGCAAATGGATTTCAGCTTGATAACAAGGATGGGAAAGAGGGCATGGAGCATTGCCATTGTGGGATTGGTAGTACCCATACTTATCGGTTTTGTCGTAGTCTTATTCCAATTTCGACTGGGTCATGTCGTCCGTAACTTCGACCATTTCGTTGTTGCATTGGTCTCCCACACTGTTATTTCATTTGCCGTCGTTGCTTCCCTGCTCAATGATCTTCAAATCCAAAACTCTGAACTAGGCAAGTTGGCATTGTCTTCCGCATTGGTGAGTGACGTACTGTGCACAATCGTTACCACCACCGGTACTGCTTTTATGTCTACTGGGGAATCTAATAGCAATGAGGGTTTTAAAAACGTCTTGTGTTTGTTTGCAATGGGCATCTTTGTTCCTTTAGTTTGTCGCCCACTCATGTTTTGGATCATCAAACATACTCCAGAAGGAAGACCTGTGAAAGATGGTTACGTTTACGTTATCATAGTACTGCTCTTCATGCTAGGTTGGCTTTCGGTTAGCATAAACCAAGAATTCGTGCTTGGAGCTTTCATTCTGGGACTGGCTGTGCCAGAGGGACCTCCACTAGGATCTGCATTGGTCAAGAAACTTAATTTCTTTGGTACCACCTTCCTATTGCCAATCTTCATCACTACCTGCATGTTGAAAGCAGATTTCTCCATGACTTATTCATCCACATCAGTTTTGACTATCTCTCTCATCGTCATCCTCACCCACTTGGTTAAAATTATATCCTGCCTTATACCCGCACTCTATTCCAACTTGCCCTTCGGTGATGCTCTCTCTCTCTCCCTCATTTTGAACGCCAAAGGCGTTGTGGAAATCGGCCTCTACTGCTTCTTATACGACCTAAAGATAATCGATGGGATATCATATGGAATAATGATTCTGAGCATAATTGTGGTAGCAGGCATTGTGCAATGGTCTGTGAGGTTTCTGTACGACCCTTCAAGAAAATACGCTGGGTACCAAAAAAGGAACATGACGAGTTTAAGACCTTGGTCTGAGCTGAGGATGCTGGTGTGCATTCATAAACCAAGCCACATATCGTCGATGATAGATGTGGTTGACCTGTTTTGTCCAACGGTAGAAAGCCCAATAGTTGTGGATGTATTGCATCTAATAGAGCTGGTGGGACGAGCCTTGCCAATTTTCATTCCCCACCGTCTTAAGAGGCAAGCTTCAGGGATTCAGCACAAGTCATACTCAGACGATGTCGTTCTTGCTTTCGACATTTACGAGCACGACAACCCACAGGCGGTGTCGGCATACCCTTGCACCGCAATCGCTCCACCCAACCTCATGTACGAAGACGTGTGCAACCTTGCCTTTGACAGGGTGGCGTCAATAATAATTCTTCCATTTCATCGAAGATGGTCCATTGATGGGGAAGTTGAATATGACGACAGGAGCAGAAGGGCACTGAACTGTAGGGTCCTAGAAAGAGCGCCGTGCTCGGTGGGAATCCTGGTGACACGACCTTCGCATAAAATAAGAGAGGCGTCGTCAACACGAGTGGGGGTGATTTATTTGGGTGGACAGGATGATGAGGAGGCGCTGTGCATAGCAAAGAGAGCAATTATGAAGGAGGAAATGAGCCTTGTGGTGTATCACGTGGTGTACAAGGCGGAGAAGGGGTGGGATGGAACGGAGGAGCTGGAAGAAATAAAGCATAGGCATGCACGGAACATAACGTATCAACAAATAATAGCAACCGAAGGGTCTCAGATGGCTGCGTTTCTGAGTGAGATTGCGAAGGAGAATGACTTCTTCATCGTTGGTAGGAGGTATGGCATCGACTCCCCTCAGACCGAAGGCCTTACAGAGTGGAGTGAGTTCCCAGAGTTAGGTGCCATCGCTGATTTTCTCGCTTCTCCAGATTTGGATACCCGTGCTTCTGTTCTCGTCGTGCAGCAACAGTTCGCACCCAAGTCACGTAAAGGCTGTCGAATCGCGCAGATTCAGAAGCTTTGCAATGTTGAGCACGAATTCAACCCTTTGGAATTGGATACCCCCAATCACTGTGCTCTTCATCTTCAGAACACACTGCAACAGATTGTATCCGACTTCCCTTCTTTCGAAATTCAAGATGCTTACATACACCATTTGCAAGAGGAGTTTGACAACGTCCACCTTCAAACCGTCCAAGTAGCTAACCAGATTGACCTTCTTGCAAGAATATACAACGATGATTCTATTATCTTGGAGGCCAAACTTGAAGAACTGGAGTTTTCTTTACATTGTATTCCACCAAAGGATCAGAAGAACACATCTGACGCTAATGAAGACATTGATTCCTCAAAGCTGGCAGATGTTTGTGCAAATATAGCCGCTGAAAATCTAGACAACAATTTAGAGCAATTTGAACTTGATAATAAGATTGATGAAATGAAGTTGATTGTAAAGTCTCTGCAGAATCTTCAGTTTACAGTCAAGTGGTTTGAAGTTGTCGAGCAGATTGAGGATGCATTAACGGGTCTAAAAGTGCTTGCATTTGATGAGAATTGCATTAGGTTGTCATTGCAGACTTATATGCCAACATTTGAGGGCATTTCCTACCAACTGCGAGTTGAAGAAGATACTATTGATGCATCTGAGCTGAATCATGAGTTATTAATTGAAGTTTTTGAGGGAACTATGAAGTTAAAGAATGTTTTCCCAAATGATGTATACCTGAGCGACATTGTTGTTTATGCAAAATCTATCAGCAAGTCCTCGTTGCAGTGGTTTATACAGAAAGTGCAAGATAGAATTATACTAAGCACACTTAGGAATCTTGTAATAAAGGATGCTAATAAATCAAGATATTCGCTTGAATACTTGGACAAAGATGAGACTATTGTGGCTCATATGGCTGGAGGAACTGATGCATACATAAAGCTGTCACATGGTTGGCCTATATTTGGTTCTCCGTTGAAGCTGATATGTATAAAGGGATCAGATGATTTGAAGAGAACATCTCTAAGTTTTCATTGCAAAGTTGAGAAGTTGGCCAATTCTTTAGATACTCGTATTCGGCAAAATATATCAAGCTTCGTCGATGCTGTTGAAAAAGTAATTATAGAACAGTTGCAGCTTGATCTTCGGGTCCAAAACCGAAAACGCAGTTGGGAGGTTGTTAAGAACCAAATGGTGTAG 3549 0.4373 MNFYANETAFLSVTEVDERSRRYQVCYAAPPHIVSDGLWRSKPNTRSPMKSFLPLFELQVLLIFVVTQICRLLLLPLKLPLFISQMMAGLILQALFAVEPLGTYMRMLFPYGTHDTITTISSIGFVLFIFINGVQMDFSLITRMGKRAWSIAIVGLVVPILIGFVVVLFQFRLGHVVRNFDHFVVALVSHTVISFAVVASLLNDLQIQNSELGKLALSSALVSDVLCTIVTTTGTAFMSTGESNSNEGFKNVLCLFAMGIFVPLVCRPLMFWIIKHTPEGRPVKDGYVYVIIVLLFMLGWLSVSINQEFVLGAFILGLAVPEGPPLGSALVKKLNFFGTTFLLPIFITTCMLKADFSMTYSSTSVLTISLIVILTHLVKIISCLIPALYSNLPFGDALSLSLILNAKGVVEIGLYCFLYDLKIIDGISYGIMILSIIVVAGIVQWSVRFLYDPSRKYAGYQKRNMTSLRPWSELRMLVCIHKPSHISSMIDVVDLFCPTVESPIVVDVLHLIELVGRALPIFIPHRLKRQASGIQHKSYSDDVVLAFDIYEHDNPQAVSAYPCTAIAPPNLMYEDVCNLAFDRVASIIILPFHRRWSIDGEVEYDDRSRRALNCRVLERAPCSVGILVTRPSHKIREASSTRVGVIYLGGQDDEEALCIAKRAIMKEEMSLVVYHVVYKAEKGWDGTEELEEIKHRHARNITYQQIIATEGSQMAAFLSEIAKENDFFIVGRRYGIDSPQTEGLTEWSEFPELGAIADFLASPDLDTRASVLVVQQQFAPKSRKGCRIAQIQKLCNVEHEFNPLELDTPNHCALHLQNTLQQIVSDFPSFEIQDAYIHHLQEEFDNVHLQTVQVANQIDLLARIYNDDSIILEAKLEELEFSLHCIPPKDQKNTSDANEDIDSSKLADVCANIAAENLDNNLEQFELDNKIDEMKLIVKSLQNLQFTVKWFEVVEQIEDALTGLKVLAFDENCIRLSLQTYMPTFEGISYQLRVEEDTIDASELNHELLIEVFEGTMKLKNVFPNDVYLSDIVVYAKSISKSSLQWFIQKVQDRIILSTLRNLVIKDANKSRYSLEYLDKDETIVAHMAGGTDAYIKLSHGWPIFGSPLKLICIKGSDDLKRTSLSFHCKVEKLANSLDTRIRQNISSFVDAVEKVIIEQLQLDLRVQNRKRSWEVVKNQMV 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01820 1182 PANTHER CATION/H + ANTIPORTER 32 777 - -
Spst1g01820 1182 Pfam Sodium/hydrogen exchanger family 61 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst1g01820 1182 Gene3D - 56 458 IPR038770 -
Spst1g01820 1182 Coils Coil 915 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01820 Spst-Chr1 26438802 26447985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01820 22 777 Antiporter Super Family AT2G28180 35.975 2.40e-143 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01820 K26731 - gmx:100785062 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01820 1 26438802 26447985 Spst1g01820 1 26438802 26447985 ECH