Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01761 ATGGCAGATTCTTCTCGGGAGGAGAACGTTTACATGGCGAAGTTGGCCGAGCAGGCTGAGCGGTACGAGGAGATGGTTGAGTTCATGGAGAAGGTAGCGAAGACTGTGGAGGTTGAGGAGTTGACTGTGGAGGAGAGGAATCTTCTCTCTGTGGCTTACAAGAACGTGATTGGGGCGAGGAGGGCTTCGTGGAGGATCATATCCTCCATTGAGCAGAAGGAGGAGAGCCGAGGCAATGAGGACCATGTGGCTATTATAAAGGAGTACAGGGGAAAGATTGAGACCGAACTCAGCAAGATCTGTGATGGGATTTTGAGCCTCCTTGAGTCTAACCTCATCCCTTCTGCTGCTTCTCCCGAGAGTAAAGTCTTTTACCTTAAAATGAAGGGTGATTACCACAGGTACCTTGCTGAGTTTAAGACTGGGGCAGAGAGGAAAGAAGCTGCAGAGAGTACTTTGCTTGCCTACAAATCTGCTCAGGATATTGCTATCGCTGACCTGGCCCCCACCCACCCGATTAGGCTTGGACTTGCTCTCAACTTTTCTGTTTTCTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAATCTTGCCAAGCAGGCATTTGATGAGGCAATTTCCGAGCTTGACACATTGGGTGAAGAGTCATACAAAGATAGTACATTGATCATGCAACTCCTCCGTGACAATCTGACTTTGTGGACATCAGACATCACGGACGATGCTGGGGATGAGATCAAGGAGACAACCAAGCAACAACCAAGTGAATAG 774 0.4819 MADSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVEVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKEYRGKIETELSKICDGILSLLESNLIPSAASPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIAIADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETTKQQPSE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01761 257 Coils Coil 12 39 - -
Spst1g01761 257 FunFam 14-3-3 protein epsilon 1 249 - -
Spst1g01761 257 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Spst1g01761 257 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Spst1g01761 257 SUPERFAMILY 14-3-3 protein 5 238 IPR036815 -
Spst1g01761 257 PANTHER 14-3-3 PROTEIN 6 240 IPR000308 -
Spst1g01761 257 PIRSF 14-3-3 1 248 IPR000308 -
Spst1g01761 257 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Spst1g01761 257 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Spst1g01761 257 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Spst1g01761 257 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Spst1g01761 257 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Spst1g01761 257 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Spst1g01761 257 SMART 1433_4 6 249 IPR023410 -
Spst1g01761 257 Gene3D - 1 249 IPR036815 -
Spst1g01761 257 Pfam 14-3-3 protein 12 236 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01761 Spst-Chr1 21866807 21868781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01761 4 257 14-3-3 family AT3G02520 89.412 1.70e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01761 K06630 - gmx:547657 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01761 1 21866807 21868781 Spst1g01761 1 21866807 21868781 ECH