Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01751 ATGGACATGCTTGGTCCCAGCCTGTGGGATGTGTGGAATTCCTCAAGCCAGGCGATGTCTGCAGAAATGGTTTCCTGCATTGCAGTGGAGTCCCTGTCAATATTGGAGAAGATGCACTCTAGAGGCTATGTGCATGGTGATGTAAAACCGGAGAACTTCTTACTAGGTCAGCCGTCTACGCCACAAGAAAAGAAATTGTATCTCGTAGACCTTGGATTAGCTACAAAGTGGAGAGACACCTCCAGTGGGCAGCATGTTGAATATGATCAACGTCCTGATATGTTTAGAGGGACTGTGCGATATGCCAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATTTTCCTTCATAAAGGCAGGTTACCTTGGCAAGGTTATCAGGGTGATAACAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGTTTCTGCCCTGCTCCTTTTAGGCAGTTCCTTGAGATTGTAGTGAACATGAAATTTGATGAGGAACCAAACTATTCTAAATTAATTTCTTTGTTTGATGGTATGCTTGGACCAAATCCTGCATTGAGGCCAATAAATACTGAAGGTGCCCAAAAGGTTGGGCAGAAGAGGGGTAGATTGAATATTGAGGAAGAAGATGATTCACAGCCCAAAAAGAAGGTTCGATTGGGGGTTCCTGCTACACAATGGATTTCAGTTTACAATGCAAGACAGCCAATGAAGCAAAGGTATCATTATAATGTAGCGGATGCAAGATTAGCACAGCACGTGGAGAGAGGGATTGCAGATGGCCTCCTTATTAGTTGTGTGGCTTCTTGTTCCAATCTCTGGGCACTTATTATGGATGCTGGAACTGGTTTTTCTAGTCAAGTTTATAAGTTGTCACCATTTTTCTTACATAAGGAATGGATCATGGAGCAGTGGGAAAAAAACTATTACATTACTTCTATTGCAGGAGCTAATAATGGGAGCTCTCTTGTTGTGATGTCAAAAGCTAATGGAAGAGGGGTGCAATTGGTGAGAAGCACACACTATACACAACAATCATACAAAGTAAGTGATTCATTCCCATTCAAATGGATAAACAAGAAGTGGAGAGAAGGTTTTCATGTGACCTCAATGGCCACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTAGAAATTCTGGATACACTGATCAGGTTATTGAACTTGATTTTCTCTATCCTAGTGAGGGAATCCACAGAAGATGGGACAATGGTTATAGGATTACAGCAACTGCTGCTACATGGGATCAATCTGCTCTGATACTGAGCATTCCTAGACGCAGGCCAGCTGATGAAACCCAGGAAACTCTGCGTACATCTCAATTTCCTAGCACACATGTTAAGGTGTTAATGGAGATCAAAACCAAGAAGGGGTGTTCATGTAGTTGGTGTCCTTCCACATGA 1470 0.4272 MDMLGPSLWDVWNSSSQAMSAEMVSCIAVESLSILEKMHSRGYVHGDVKPENFLLGQPSTPQEKKLYLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPAPFRQFLEIVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARQPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFSSQVYKLSPFFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSKANGRGVQLVRSTHYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNSGYTDQVIELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPADETQETLRTSQFPSTHVKVLMEIKTKKGCSCSWCPST 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01751 489 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01751 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Spst1g01751 489 PANTHER CASEIN KINASE-RELATED 1 452 - -
Spst1g01751 489 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
Spst1g01751 489 Pfam Protein kinase domain 7 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01751 489 SMART serkin_6 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01751 489 Gene3D Transferase(Phosphotransferase) domain 1 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01751 Spst-Chr1 21737619 21747013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01751 35 192 MAP Kinase Kinase Kinase AT5G50180 24.375 1.72e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Spst1g01751 Pkinase 2.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01751 - - gmx:100819969 922.924