Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01741 ATGAGAGCCATAATATCCCGTCACCTTTCACTCCTCAATTCTAGGATCACCACCCCAACCCCATCCTCTCTTTTTTCTATAAGAAATACCACTACTTGTACCATGTCAAACTCACATCATTCCTCTGCTTTCAACACACCCAGAGTGGTTCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGGGCTGTTGTTAGAAGAGGCATTGGAAGGAGTGACTTGAAGAACTTGGATCCCTTCCTGATGTTGGATCACTTCTCAGTATCTCCTCCCGCCGGATTTCCTGATCATCCACACAGAGGTTTTGAAACTGTCACCTACATGTTAGAGGGAGGTATTACTCACCAAGATTTTGCTGGCCACAAGGGTACAATAAGAGCTGGTGATGTTCAGTGGATGACTGCAGGCAGGGGAATAATTCACTCTGAAATGCCCGCAGAAGCAGACAACAACAAGGGATTGCAATTATGGATCAATTTATCCTCCAAGGACAAAATGATAGAGCCTAACTACCAAGAACTTCCAAGTGAGAACATACCAACAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTGCAATCCCCTGTGTATACTCGAACACCAACCATGTTCCTTGTTTTCTCCATGATGCCCGGAAGTGAGTGGCATCAGAGCATTCCAGAGTCGTGGAATTGCTTTGTTTATGTGATTGAAGGAGAAGGGGTTTTCGGGTGTCAAAGTTCATCCCCAACTGTGGCACATCATGTTCTTGTTCTGAGTCTAGGTGATGGACTTAGCGTGTGGAACAACTCTTCAAAGCCTCTGAGGTTTGTTGTGATAGGAGGACAGCCACTGAACGAGCCAGTGGCTCAGTATGGGCCATTTGTGATGAACACACAGTCTGAGATTGAGAAAACTCTTGAAGACTATCAATTCGGGAGGAATGGGTTTGAGATGAGGAAGTATTGGAGGTCTCAATAG 987 0.4549 MRAIISRHLSLLNSRITTPTPSSLFSIRNTTTCTMSNSHHSSAFNTPRVVLKKVLAKSQHEGDGAVVRRGIGRSDLKNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRAGDVQWMTAGRGIIHSEMPAEADNNKGLQLWINLSSKDKMIEPNYQELPSENIPTAEKDGVEVRVIAGEAMGVQSPVYTRTPTMFLVFSMMPGSEWHQSIPESWNCFVYVIEGEGVFGCQSSSPTVAHHVLVLSLGDGLSVWNNSSKPLRFVVIGGQPLNEPVAQYGPFVMNTQSEIEKTLEDYQFGRNGFEMRKYWRSQ 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01741 328 CDD cupin_pirin_C 210 286 - -
Spst1g01741 328 PANTHER PIRIN-RELATED 35 328 IPR012093 -
Spst1g01741 328 SUPERFAMILY RmlC-like cupins 48 326 IPR011051 -
Spst1g01741 328 Gene3D Jelly Rolls 182 287 IPR014710 -
Spst1g01741 328 PIRSF Pirin 46 326 IPR012093 -
Spst1g01741 328 Pfam Pirin C-terminal cupin domain 214 318 IPR008778 -
Spst1g01741 328 CDD cupin_pirin_N 65 162 - -
Spst1g01741 328 Gene3D Jelly Rolls 61 313 IPR014710 -
Spst1g01741 328 FunFam pirin 61 195 - -
Spst1g01741 328 Pfam Pirin 68 160 IPR003829 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g01741 Spst-Chr1 21598475 21600168 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01741 45 323 Calmodulin-binding Proteins AT3G59220 65.125 2.47e-133 379