Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g01735 | ATGAATTCTAGGGGATCCTTGACTCCACTCAAATCAATTCTTTCTGTTACAATTGGAATTGCAGGAGCAGACAAGTTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAATTGCCTCCTCCCAACACCAAGGAAGGACATGGACCCGCCGTTCAAATTGCTGCTCAAACTTTTACTTTCCGTGAACTTGCAGCTGCAACAAAAAACTTTAGGCCAGACTCCTTTGTAGGGGAAGGTGGTTTCGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGGTCAGATTGTTGCAGTCAAACAGTTAGACAAAAATGGTCTCCAGGGTAATAGGGAATTCCTTGTAGAAGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTGAATCTGATTGGATACTGTGCGGATGGGGAACAACGCCTCCTTGTTTATGAATTTATGCCTTTGGGATCATTGGAAGATCACCTTCATGACCTTCCCCCTGATAAGGAGCCACTAGATTGGAACACTAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGATTAGAGTACCTGCATGACAAGGCAAATCCACCTGTCATTTACAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGGTACCGCCCTAAGCTTTCTGACTTCGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACCCGAGTCATGGGAACTTATGGTTACTGCGCTCCTGAGTATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGCTTTGGGGTTGTCTTCTTAGAGCTTATTACTGGACGCAAAGCAATTGACAGCACCCAGCCCCATGGAGAACAGAATCTTGTCACATGGGTTTTGCTCTATTCTCTCCTTGTCATTGTAGTTAGTTCAGCATGCATAAGCTCTTGTAAATTAAAATGGAGATGTGATTGTGGTTTTTTATGTATGTTTGTGCAGGCACGTCCACTTTTTAACGACCGCAGGAAGTTTTCAAAGTTGGCTGATCCCAGGCTGCAGGGACGGTTTCCCATGCGGGGTCTTTACCAGGCGCTAGCTGTGGCATCGATGTGCATCCAAGAATCGGCTGCCACACGCCCTCTGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCAAACCAGGCATATGACCCCAACAATGGTGGGCATGGTTATAGGGGGTCAAGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATACTGAAAAATGATGAAGCTGGGGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCAAGAATGTTAAACAGAGATCTAGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGACAGAAAAGACAACAAAGTTTGCAGCAGAGCAGTTATGTTTCTAACTAA | 1443 | 0.4567 | MNSRGSLTPLKSILSVTIGIAGADKLRSRSNGGSKRELPPPNTKEGHGPAVQIAAQTFTFRELAAATKNFRPDSFVGEGGFGRVYKGRLETTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYRPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWVLLYSLLVIVVSSACISSCKLKWRCDCGFLCMFVQARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNGGHGYRGSSDDKRNRDDKGGRILKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLRQKRQQSLQQSSYVSN | 480 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g01735 | 480 | MobiDBLite | consensus disorder prediction | 25 | 48 | - | - | |
Spst1g01735 | 480 | Pfam | Protein kinase domain | 74 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g01735 | 480 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 392 | - | - | |
Spst1g01735 | 480 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 384 | IPR011009 | - | |
Spst1g01735 | 480 | FunFam | Serine/threonine-protein kinase PBS1 | 43 | 146 | - | - | |
Spst1g01735 | 480 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 99 | IPR017441 | GO:0005524 | |
Spst1g01735 | 480 | FunFam | Serine/threonine-protein kinase PBS1 | 147 | 294 | - | - | |
Spst1g01735 | 480 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g01735 | 480 | CDD | STKc_IRAK | 76 | 379 | - | - | |
Spst1g01735 | 480 | ProSiteProfiles | Protein kinase domain profile. | 70 | 382 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g01735 | 480 | MobiDBLite | consensus disorder prediction | 397 | 448 | - | - | |
Spst1g01735 | 480 | Gene3D | Phosphorylase Kinase; domain 1 | 54 | 146 | - | - | |
Spst1g01735 | 480 | MobiDBLite | consensus disorder prediction | 392 | 448 | - | - | |
Spst1g01735 | 480 | PANTHER | OS07G0668900 PROTEIN | 48 | 391 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g01735 | Spst-Chr1 | 21528235 | 21532848 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g01735 | 42 | 382 | Glycoside Hydrolase | AT3G07070 | 65.396 | 3.34e-158 | 453 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Spst1g01735 | Pkinase | 4.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g01735 | K13430 | - | gmx:100305422 | 752.666 |