Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01713 ATGGCCTCTTTCACTACTTGCCCTGCACCTTCACTCGTTGACGTGAAGAAAGTTCTCTTCATAATGGGTGCAACTGGCACGGGAAAAACCAAACTTTCCATCACTTTGGCCAAACAATTCCCCTCTGAAATCGTCAACGCTGACAAAATTCAAGTCTACAAGGGCCTTGACATCATCACCAACAAGGTTTCCGAGTCTGAACGTTGTGGCATTCCCCATCACCTGCTAGGCATCATTGATGACCCTGATTATGACTTCACCATTGATGACTTCTGCAAGCATGTCCTTCTTGCTCTTGATACCATCATTGAAAATGGACACCTACCCATTATCGTGGGGGGCTCCAACAATTACCTCTCAGCCTTGCTGGAGGACCCTAACATTGCATTTCGTTCCAAATATGACTGTTTCTTCATCTGGGTTGATGTGTCTTTGCCTGTGTTGTTTCCGTATTTGGACAAAAGGGTGGACGAAATGGTTGATGCAGGAGTTGTGGATGAGCTTCGTGAAGTTTATGCGGGTGGAGCAGATTGCACTCGTGGGATTAGAAGAGCCATTGGGGTTCCTGAGCTGGGAGAGTATTTCCTTGTCGAGAAGGAAATCGACGACGAGGCTCTAAAGAAGAAGATGCTGCAACATGCTATTGTCAAAACCAAAGAGAACACTTGTAAGTTGGCTGAGACGCAACTTCTCAAGATTCATAAGATGGACGATGGTCTTGGATGGAGAATGGCCAGAATTGATTCCACAAAAGTGTTTGAGGCCATTTTAAAAGGAGTGGATTACAAGCAACTGTACCAAGAGATTGTGTTCGAACCATGCATGGAGATGGTTACAGAATTTCTAGAGACAACTGAATTGAAAATGGTACCTAGTCAGGATGGTGAACAAGCCACAATTTGTGATTAA 909 0.4466 MASFTTCPAPSLVDVKKVLFIMGATGTGKTKLSITLAKQFPSEIVNADKIQVYKGLDIITNKVSESERCGIPHHLLGIIDDPDYDFTIDDFCKHVLLALDTIIENGHLPIIVGGSNNYLSALLEDPNIAFRSKYDCFFIWVDVSLPVLFPYLDKRVDEMVDAGVVDELREVYAGGADCTRGIRRAIGVPELGEYFLVEKEIDDEALKKKMLQHAIVKTKENTCKLAETQLLKIHKMDDGLGWRMARIDSTKVFEAILKGVDYKQLYQEIVFEPCMEMVTEFLETTELKMVPSQDGEQATICD 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01713 302 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 16 282 IPR039657 -
Spst1g01713 302 Gene3D - 16 282 IPR027417 -
Spst1g01713 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 191 IPR027417 -
Spst1g01713 302 FunFam Adenylate isopentenyltransferase 5, chloroplastic 145 244 - -
Spst1g01713 302 Pfam IPP transferase 51 125 - -
Spst1g01713 302 Pfam IPP transferase 131 230 - -
Spst1g01713 302 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 145 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01713 Spst-Chr1 21172539 21173447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01713 132 284 C2H2 Transcription Factor Family AT2G27760 31.844 7.76e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01713 K10760 - gmx:121173984 468.774