Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01712 ATGGCGTCTTTCACTCGTTCTACACCTTCAATCGCTGAAAAGAAGAAGGGCCTTGACATCATCACCAACAAGGTTTCCGAGTCTGAACGTTGTGGCATTCCCCATCACCTGCTAGGCATCATTGATGACCCTGATTATGACTTCACCATTGATGACTTTTGCAAGCATGTCCTTCTTGCTCTTGATACCATCATTGAAAATGGACACCTACCCATTATCGTGGGAGGCTCCAACACTTACCTCGCAGCCTTGCTGGAGGACCCTAACATTGCATTTCGTTCCAAATATGACTGTTTCTTCATCTGGGTTAATGTGTCTTTGCCTGTGTTGTTTCCGTATTTGGACAAAAGGGTGGACGAGATGGTTGATGCAGGAGTTGTGGATGAGATTCGAGAAGCTTATGTGGATGGAGCAGATTGCACTCGTGGGATCAGAAGAGCCATTGGGGTTCCTGAGCTGGGAGAGTATTTCCTTGTCGAGAAGGAAATCTACGACGAGGCTCTAAAGAAGAAGATGCTGCAACATGCTATTGTCAAAACCAAAGAGAACACTTGTAAGTTGGCTGAGAGGCAACTTTTGAAGATCCATAAGATGAACTATGATCTTGGATGGAGAATGAGCAAAATTGATTCCACAAAAGTGTTTGAGGCTGTTTTAAAAGGAGTGGATTATAAGCAATTGTATGAAGAGATTGTGCTGAAACCAAGCTTGGAGATGGTAGAAATATTTCTGCAGGAGACAACTTGGACATGGGGAAAGACACTTCACCTAAATGATGAAAATGTGACCATTTGTGCTTAA 801 0.4345 MASFTRSTPSIAEKKKGLDIITNKVSESERCGIPHHLLGIIDDPDYDFTIDDFCKHVLLALDTIIENGHLPIIVGGSNTYLAALLEDPNIAFRSKYDCFFIWVNVSLPVLFPYLDKRVDEMVDAGVVDEIREAYVDGADCTRGIRRAIGVPELGEYFLVEKEIYDEALKKKMLQHAIVKTKENTCKLAERQLLKIHKMNYDLGWRMSKIDSTKVFEAVLKGVDYKQLYEEIVLKPSLEMVEIFLQETTWTWGKTLHLNDENVTICA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01712 266 FunFam Adenylate isopentenyltransferase 5, chloroplastic 107 206 - -
Spst1g01712 266 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 16 243 IPR039657 -
Spst1g01712 266 Pfam IPP transferase 93 192 - -
Spst1g01712 266 Pfam IPP transferase 16 87 - -
Spst1g01712 266 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 107 206 - -
Spst1g01712 266 Gene3D - 16 244 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01712 Spst-Chr1 21167870 21168786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01712 17 85 C2H2 Transcription Factor Family AT2G27760 40.580 1.84e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01712 K10760 - gmx:121173984 410.223