Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01711 ATGGCTATGGTGGTCCTCACACTCCTTTTGGCCATACTTGCTATTCTCCTACTTAAACTCGTCTATGACAACCTCTCATGCTACTTGTTCACCCCTCTACGCATAAAAAGGATCATGGAGATGCAAGGTGTCCGGGGCCCAAAACCTAGTTTCTTCACAGGCAACATCCTAGACATGGCTTCCCTTGTCTCCAAAGCAACCTCCCAAGACATGGAAACCATAAGCCATGACATTGTTGGACGTCTCCTCCCACATTTCTTACTTTGGTCTAGCCAATTTGGAAAGAGGTTTCTATATTGGAATGGAACAGAACCGAGGTTGTGCCTCACTGAGACCGAATTGATCAAAGAGTTCCTTTCAAAACACAGTACGGTATCTGGGAAATCCTGGCAACAAAGGCAGGGCTCAAAGAATTTCATTGGGCAAGGACTGTTGATGGCAAATGGTAAAGATTGGTACCACCAACGTCACATCGTTGCCCCTGCATTCACGGGAGACAGACTTAAGAGCTATGCTGGGCACATGGTGGAATGCACTAAGGAGATGCTCCAATCACTGAAACTTGCGTTAGAATGTGGCCAGACTGAGGTGGAGATTGGTCACTTCATGACTAAACTCACTGCGGATATTATCTCTAGGACTGAGTTTGGTACAAGCTATCAGAAGGGGAAGAAAATATTCCACCTCCTCACACTGCTGCAGAGTAGTTGTGCTCAAGCAAGTCGTCATCTATGCTTTCCTGGAAGCAGGTTTTTCCCAAGCAAGTATAACAGAGAGATAAAGTGTTTGAAGATGGAGGTGGAGACTCTGCTGATGGAGATCATACAAAGCAGGAAAGACTGTGTGGAGATTGGAAGAAGCAATTCTTATGGGAATGATTTGTTGGGGATGCTTCTGAATGAGATGCAGAAGAAAAAAGGGAATGGAAACAGCATCAATCTGCAGCTAGTTATGGATCAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACTGCCCTTTTACTCACTTGGACAGTCATGTTACTAGCCAGCAACACCTCTTGGCAGGAGAAAGTGAGAGACGAGGTCAAAAGTGTCTGCAATGGGGGAATTCCTTCTCTGGATCAACTCTCAAAACTCACTCTTTTGCATATGGTGATAAACGAATCAATGAGGTTGTATCCCCCAGCATCGGTGCTTCCTAGAATGGCGTTTGAAGACATAGTGCTTGGTGACCTTAACATCCCCAAGGGCCTATCAATTTGGATCCCAGTGTTGGCTATTCATCACAGTGAAAAGTTATGGGGAGAAGATGCAAATGAGTTCAACCCAGAGAGGTTCACTTCAAAGTCTTTTGTTTCTGCTCGATTTTTACCATTTGCTTCTGGCCCCAGAAATTGCGTTGGACAAGCTTTTGCGTTAATGGAGGCTAAGATCATATTAGCCATGTTGATTTCTCGGTTCAGCTTCACCATTTCTGAGAATTACCGTCATGCCCCTGTGGTTGTCCTCACCATCAAGCCCAAATATGGGGTTCAGGTTTGCTTGAAGCCCTTGGAGCCATGA 1548 0.4509 MAMVVLTLLLAILAILLLKLVYDNLSCYLFTPLRIKRIMEMQGVRGPKPSFFTGNILDMASLVSKATSQDMETISHDIVGRLLPHFLLWSSQFGKRFLYWNGTEPRLCLTETELIKEFLSKHSTVSGKSWQQRQGSKNFIGQGLLMANGKDWYHQRHIVAPAFTGDRLKSYAGHMVECTKEMLQSLKLALECGQTEVEIGHFMTKLTADIISRTEFGTSYQKGKKIFHLLTLLQSSCAQASRHLCFPGSRFFPSKYNREIKCLKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQKKKGNGNSINLQLVMDQCKTFFFAGHETTALLLTWTVMLLASNTSWQEKVRDEVKSVCNGGIPSLDQLSKLTLLHMVINESMRLYPPASVLPRMAFEDIVLGDLNIPKGLSIWIPVLAIHHSEKLWGEDANEFNPERFTSKSFVSARFLPFASGPRNCVGQAFALMEAKIILAMLISRFSFTISENYRHAPVVVLTIKPKYGVQVCLKPLEP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01711 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 26 505 - -
Spst1g01711 515 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 CDD CYP72_clan 83 507 - -
Spst1g01711 515 Pfam Cytochrome P450 92 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 SUPERFAMILY Cytochrome P450 46 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01711 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01711 Spst-Chr1 21142952 21146300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01711 1 375 Cytochrome P450 AT5G38450 66.048 3.37e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01711 K10717 - gmx:100808392 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00417 4 5201777 5207399 Spst1g01711 1 21142952 21146300 PCT