Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01692 ATGTCTTTTGTGGATAACATTATTGTACATTGTTTCCATAAAGTAGAGAAGAACCCTTTGCCTTTTGTTTTCTTTGGACTGTCGGTGGTTTTGGGGAGACTTGCAGAAATGAATGATTCCACGGTGAAGAACTTGGCCATCACGGAGAAGAAGTTGCCGCAGAAGCCTGGAGGTTGTGTTGGCATTTTCTTTCAGCTTATCGATTGGAAGAGGAAACTATCCAAAAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCCGCTCGTGCCAAAAAATTCAAAGGGGATGAAAAGATGCCAAATTCCAAGATTCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCCAGTGCCAAAAAAGGTGGGAATCATGGTGCAGATGTAGAGCAAAGGAGTGAAATGCGAGTTCCAAGTCTGGTTGCCAGGTTGATGGGTCTAGAATCTATTCCAACTGCTCAGCGAGATAAGTCCAAGAAAGCCTTGTGTGCTGATGGGAAGAAGGAGTCTTTGGGTGACCATTGTGAGTTGGATAGGCAAGGCATGGATTTGGAGATGGGAGTTGTGAAGCATGATTCAAGACCTCAAAAGCTTCAGAAAACTGGGTCCTACGAGAGAAGGGCAGTGACTAGGTTTGGATCTGAGGCTTTCCAGATTAAGAGTGTATTATCCCGAGGAAGAAAGTATCATCACCATCATCATCCCAAGCTTGCTTCTTCTTTGAAAAGCCCGAGAATTCCTTCTGGAAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGTGCAGCAACTAAACTTTTGGAACCTGGGCTGCAGAGCAGAAGTAGGGCTAAAGGTTCTCTTACATATCCTGCTTCCATGTATACTCCTAAGACTGGCATTGTGACAAGTGATGTGCAAAATCAATCTTGTTATGAAGCCGGTTCATGCAAACAATTGATGGGGCAGACCTCTTGCAAAAACTGTGGTAATTTGCTAGATGTTGTTGACTGCAAGCTTGAGGTTGGGGGACAACCATTGGATCCTCAGCCCATGGTTTCAGATGTGATCACAGCTACCTCTATGGTATCATCAGAGAAGAAGGGAAAGTCATTCACTTCCCATGGACATGACAGAGATGTAGTTCTTCTGAGAAGTCAGGAAAAGCTTATATCTCTTGATACTGAAGAGAAGGGAAAACATAATGTACATAATTCATGGAGTGAACCTACTGTCAGAAGAATTTCAATGCCCCATGATGGTCTACCTAAATGGAATTCATCTTGTCAACCATCAAGGACCCTAGAGGATGATGCATCTTCTTTTCCCTTAAAACACAAAACTCAAACACAAGAGCAGATGATAAGCAGTGAAAGATATTCATCTGGATCTACACTGAGTGATATGCAAGTAAAAAGGGTATCATCATCTACCACTACTACGAATGGGGGTAAAGATTTTGTTTCTATGAATAGAAGTCTTAGTGGTCGAACAAGGACAAGATCACCAACCAAAGAGGATAGTTCCAAATTTGACTTAGAAAGAAAACCTTATAATCGACAGCATAGTTCCTTGTCTCACGTAAGGACATTAGAGAGAAAAAGAAGGATACCAAATGTCACACAACTAGAAGGCACGGGTTCTGTTTATTCAGTTGGTGCAAAACATAGAAATCTCCATTCTAGTGGATTGGGTGGCAAAAGGAGGGATTTTAATGCTTCCTCCTTGAACAATTCTGTTGTAAAAAATAAGCAAGTTGCTCAAGGAGAAAGAATTATTAAGGTTAATGACAACAAGATCAATGATGTAGTGTCATTTACATTTAATTCTCCTCTGAAGCAAAAGGTAGGAATAACTGTTGAGAGGGAAGAGACAAGCAGTGACAAAGAGAGTATCCAAAGGCCTTCACCATTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAAGAATTAACATCTCAAAGAGACGAAGAGTTGGCCACAGGTGCTCTACCAAAGAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTTTAAGTTCAGAGCATTTGATCTGTCATGATGGTCATCATCACGTGTTTAATGAAAACGTTGGTTTGCATTATGGGGAAAAACAAGAAAGGTTATTAGGAAGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCACGGTTTTCACCCTGACTCCATGAATCACTCTTATTATGGTCAGCTAGAACATGATACTGAACTTTCAGATTCTGCAACATCCTTTACCAAAGGGAGGATAGGTGAGATACTGAGTGATCTTGTCAACCAACTTCCCAGGGCATTGGAAAGTTTGCACACTTTTGGGACAGTATTAACAATAAGCAAGCTAAACCATATGAAGGATATTTTCTTGCATGCTGAGTTGGTGCTTGGAATTACAACTGATCGCAGAGAGGATGAAGGGCCCCCACAACTTATAATTTATCAGTTTCTCGTTGATGATCTTGAGAGTATGACGAGTGATCCCATGTGGGCAGATGTGGGTTGTGAGGATTCTAAACAGAGAAAGGAGCTTAAGGGTTTTCTCCTTGATTGTATTGTAGAATATCTAGAATCAAACTGCAGCCAATATTTCAACTCTGGATTCAGGGCATGGACAAAGCTACCTTTATGCATGAGAGCTGAGATGCTGGCTCAAGAGGTCAAGAGGGAGATCAACAAGTGCTTATCTATGGCTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACAAACTTTGATATTGAAGCATTTGAGGCTGGTGTTGATGTAGATGGTGATATACTTCAAACTTTGGTTGATGAAGTTGTTGAAGACCTTGTGAGTTGCAAACACGGTTCCATTTCCTTCTAA 2922 0.4141 MSFVDNIIVHCFHKVEKNPLPFVFFGLSVVLGRLAEMNDSTVKNLAITEKKLPQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMPNSKIHLIANENSGGFPSAKKGGNHGADVEQRSEMRVPSLVARLMGLESIPTAQRDKSKKALCADGKKESLGDHCELDRQGMDLEMGVVKHDSRPQKLQKTGSYERRAVTRFGSEAFQIKSVLSRGRKYHHHHHPKLASSLKSPRIPSGKSASRSSRLIGAATKLLEPGLQSRSRAKGSLTYPASMYTPKTGIVTSDVQNQSCYEAGSCKQLMGQTSCKNCGNLLDVVDCKLEVGGQPLDPQPMVSDVITATSMVSSEKKGKSFTSHGHDRDVVLLRSQEKLISLDTEEKGKHNVHNSWSEPTVRRISMPHDGLPKWNSSCQPSRTLEDDASSFPLKHKTQTQEQMISSERYSSGSTLSDMQVKRVSSSTTTTNGGKDFVSMNRSLSGRTRTRSPTKEDSSKFDLERKPYNRQHSSLSHVRTLERKRRIPNVTQLEGTGSVYSVGAKHRNLHSSGLGGKRRDFNASSLNNSVVKNKQVAQGERIIKVNDNKINDVVSFTFNSPLKQKVGITVEREETSSDKESIQRPSPLRVDALGAFLEQKLKELTSQRDEELATGALPKKSSAMILQELISALSSEHLICHDGHHHVFNENVGLHYGEKQERLLGRTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNHSYYGQLEHDTELSDSATSFTKGRIGEILSDLVNQLPRALESLHTFGTVLTISKLNHMKDIFLHAELVLGITTDRREDEGPPQLIIYQFLVDDLESMTSDPMWADVGCEDSKQRKELKGFLLDCIVEYLESNCSQYFNSGFRAWTKLPLCMRAEMLAQEVKREINKCLSMAGMVPDEIIEWEMSHSLGKWTNFDIEAFEAGVDVDGDILQTLVDEVVEDLVSCKHGSISF 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01692 973 Pfam Domain of unknown function (DUF4378) 800 958 IPR025486 -
Spst1g01692 973 MobiDBLite consensus disorder prediction 413 427 - -
Spst1g01692 973 MobiDBLite consensus disorder prediction 408 515 - -
Spst1g01692 973 MobiDBLite consensus disorder prediction 434 488 - -
Spst1g01692 973 Pfam DUF761-associated sequence motif 128 154 IPR032795 -
Spst1g01692 973 MobiDBLite consensus disorder prediction 223 237 - -
Spst1g01692 973 MobiDBLite consensus disorder prediction 223 253 - -
Spst1g01692 973 MobiDBLite consensus disorder prediction 489 515 - -
Spst1g01692 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 45 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01692 Spst-Chr1 20917450 20921554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01692 35 963 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.652 2.04e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01692 - - gmx:100813026 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01692 1 20917450 20921554 Spst1g01692 1 20917450 20921554 ECH